hu.MAP 3.0: Complex View
Human Protein Complex Map
Search for a protein
Complex: huMAP3_02515.1
Confidence: Extremely High
Proteins| Genename | Protein Name | Uniprot Annotation Score | Links |
|---|---|---|---|
| PDAP1 | 28 kDa heat- and acid-stable phosphoprotein (PDGF-associated protein) (PAP) (PDGFA-associated protein 1) (PAP1) | 4 | UniProt NCBI |
| RTRAF | RNA transcription, translation and transport factor protein (CLE7 homolog) (CLE) (hCLE) | 5 | UniProt NCBI |
| DEK | Protein DEK | 5 | UniProt NCBI |
| FAM98A | Protein FAM98A | 5 | UniProt NCBI |
| RTCB | RNA-splicing ligase RtcB homolog (EC 6.5.1.8) (3'-phosphate/5'-hydroxy nucleic acid ligase) | 5 | UniProt NCBI |
Enrichments
| Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
|---|---|---|---|---|
| GO:0072669 | 5.37995977657e-05 | 0.6 | FAM98A RTRAF RTCB | tRNA-splicing ligase complex |
| CORUM:6301 | 0.000136445626745 | 0.4 | RTCB RTRAF | tRNA Splicing Ligase Complex |
| GO:0006388 | 0.000158467845213 | 0.6 | FAM98A RTRAF RTCB | tRNA splicing, via endonucleolytic cleavage and ligation |
| GO:0000394 | 0.000211268761872 | 0.6 | FAM98A RTRAF RTCB | RNA splicing, via endonucleolytic cleavage and ligation |
| REAC:R-HSA-6784531 | 0.0224106525753 | 0.4 | RTCB RTRAF | tRNA processing in the nucleus |
Edges
| Protein 1 | Protein 2 | Score | ProteomeHD | Evidence |
|---|---|---|---|---|
| RTRAF | FAM98A | 0.999 | 0.178 | hein_WMM bioplex3_HEK293 bioplex () bioplex_WMM Guru bioplex3_WMM bioplex3_HCT116 gupta_WMM fraction boldt_WMM treiber_WMM |
| FAM98A | RTCB | 0.998 | 0.25 | hein_WMM bioplex3_HEK293 bioplex () bioplex_WMM bioplex3_WMM youn_WMM bioplex3_HCT116 gupta_WMM fraction boldt_WMM treiber_WMM |
| RTRAF | RTCB | 0.996 | 0.92 | hein_WMM bioplex_WMM bioplex3_WMM gupta_WMM fraction boldt_WMM treiber_WMM |
| PDAP1 | RTRAF | 0.977 | 0.12 | hein_WMM bioplex_WMM bioplex3_WMM bioplex3_HCT116 gupta_WMM treiber_WMM WMM_only |
| DEK | RTRAF | 0.976 | 0.13 | hein_WMM bioplex_WMM bioplex3_WMM gupta_WMM WMM_only |
| DEK | RTCB | 0.97 | 0.118 | hein_WMM bioplex_WMM bioplex3_WMM youn_WMM gupta_WMM WMM_only treiber_WMM |
| PDAP1 | DEK | 0.679 | 0.156 | hein_WMM bioplex3_HEK293 bioplex_WMM bioplex3_WMM youn_WMM gupta_WMM WMM_only |
| PDAP1 | RTCB | 0.498 | 0.08 | hein_WMM bioplex3_HEK293 bioplex_WMM bioplex3_WMM youn_WMM bioplex3_HCT116 gupta_WMM WMM_only |
| DEK | FAM98A | 0.006 | 0.054 | hein_WMM bioplex () bioplex_WMM bioplex3_WMM youn_WMM bioplex3_HCT116 gupta_WMM treiber_WMM |
| PDAP1 | FAM98A | 0.004 | 0.1 | bioplex3_HEK293 bioplex () bioplex_WMM bioplex3_WMM youn_WMM bioplex3_HCT116 gupta_WMM |
Related Complexes