hu.MAP 3.0: Complex View
Human Protein Complex Map
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Complex: huMAP3_04919.1
Complex Portal: CPX-16656
Confidence: Extremely High  
Proteins| Genename | Protein Name | Uniprot Annotation Score | Links |
|---|---|---|---|
| PDK1 | [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 1) (PDH kinase 1) | 5 | UniProt   NCBI |
| PDHX | Pyruvate dehydrogenase protein X component, mitochondrial (Dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex) (E3-binding protein) (E3BP) (Lipoyl-containing pyruvate dehydrogenase complex component X) (proX) | 5 | UniProt   NCBI |
| PDK3 | [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 3) | 5 | UniProt   NCBI |
| PDK2 | [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 2) (PDH kinase 2) (PDKII) | 5 | UniProt   NCBI |
| PDHA1 | Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial (EC 1.2.4.1) (PDHE1-A type I) | 5 | UniProt   NCBI |
| PDHB | Pyruvate dehydrogenase E1 component subunit beta, mitochondrial (PDHE1-B) (EC 1.2.4.1) | 5 | UniProt   NCBI |
| DLAT | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial (EC 2.3.1.12) (70 kDa mitochondrial autoantigen of primary biliary cirrhosis) (PBC) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (M2 antigen complex 70 kDa subunit) (Pyruvate dehydrogenase complex component E2) (PDC-E2) (PDCE2) | 5 | UniProt   NCBI |
Enrichments
| Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
|---|---|---|---|---|
|   REAC:R-HSA-204174 | 1.27698634199e-13 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | Regulation of pyruvate dehydrogenase (PDH) complex |
|   GO:0006086 | 2.2691065e-12 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | acetyl-CoA biosynthetic process from pyruvate |
|   REAC:R-HSA-70268 | 4.16616794075e-12 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | Pyruvate metabolism |
|   REAC:R-HSA-5362517 | 1.2743464183e-11 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | Signaling by Retinoic Acid |
|   GO:0006085 | 5.57191707223e-11 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | acetyl-CoA biosynthetic process |
|   REAC:R-HSA-71406 | 7.59806873486e-11 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | Pyruvate metabolism and Citric Acid (TCA) cycle |
|   GO:0006084 | 5.92308831628e-10 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | acetyl-CoA metabolic process |
|   GO:0071616 | 4.51968196359e-09 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | acyl-CoA biosynthetic process |
|   GO:0035384 | 4.51968196359e-09 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | thioester biosynthetic process |
|   GO:0034030 | 1.54182545094e-08 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | ribonucleoside bisphosphate biosynthetic process |
|   GO:0033866 | 1.54182545094e-08 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | nucleoside bisphosphate biosynthetic process |
|   GO:0034033 | 1.54182545094e-08 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | purine nucleoside bisphosphate biosynthetic process |
|   REAC:R-HSA-1428517 | 3.16392999894e-08 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | The citric acid (TCA) cycle and respiratory electron transport |
|   GO:0006637 | 1.77907089057e-07 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | acyl-CoA metabolic process |
|   GO:0035383 | 1.77907089057e-07 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | thioester metabolic process |
|   REAC:R-HSA-9006931 | 2.15038697685e-07 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | Signaling by Nuclear Receptors |
|   GO:0006090 | 3.52753783753e-07 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | pyruvate metabolic process |
|   GO:0034032 | 5.80297190308e-07 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | purine nucleoside bisphosphate metabolic process |
|   GO:0033865 | 5.80297190308e-07 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | nucleoside bisphosphate metabolic process |
|   GO:0033875 | 5.80297190308e-07 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | ribonucleoside bisphosphate metabolic process |
|   GO:0044272 | 2.67973063947e-06 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | sulfur compound biosynthetic process |
|   GO:0050812 | 3.84440695359e-06 | 0.6 | PDK3 PDK1 PDK2 | regulation of acyl-CoA biosynthetic process |
|   GO:0010510 | 3.84440695359e-06 | 0.6 | PDK3 PDK1 PDK2 | regulation of acetyl-CoA biosynthetic process from pyruvate |
|   GO:0009152 | 6.71183379666e-06 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | purine ribonucleotide biosynthetic process |
|   GO:0009260 | 8.9004423659e-06 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | ribonucleotide biosynthetic process |
|   GO:0004740 | 9.61003071434e-06 | 0.6 | PDK3 PDK1 PDK2 | pyruvate dehydrogenase (acetyl-transferring) kinase activity |
|   GO:0046390 | 1.06522796203e-05 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | ribose phosphate biosynthetic process |
|   GO:0006164 | 1.62580436396e-05 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | purine nucleotide biosynthetic process |
|   GO:0072522 | 1.85772293741e-05 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | purine-containing compound biosynthetic process |
|   GO:0009165 | 2.78328719987e-05 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | nucleotide biosynthetic process |
|   GO:1901293 | 3.06422269678e-05 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | nucleoside phosphate biosynthetic process |
|   GO:0045254 | 3.362820138e-05 | 0.6 | PDHX PDHA1 PDK2 | pyruvate dehydrogenase complex |
|   GO:0005967 | 3.362820138e-05 | 0.6 | PDHX PDHA1 PDK2 | mitochondrial pyruvate dehydrogenase complex |
|   GO:0006790 | 5.97436292687e-05 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | sulfur compound metabolic process |
|   GO:0042762 | 0.000115261178119 | 0.6 | PDK3 PDK1 PDK2 | regulation of sulfur metabolic process |
|   GO:0009150 | 0.000221831775662 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | purine ribonucleotide metabolic process |
|   GO:0009259 | 0.000259735617241 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | ribonucleotide metabolic process |
|   WP:WP5050 | 0.000264396631677 | 0.4 | PDHA1 PDK1 | TCA cycle in senescence |
|   GO:0019693 | 0.000311878876809 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | ribose phosphate metabolic process |
|   GO:1900371 | 0.000436807598019 | 0.6 | PDK3 PDK1 PDK2 | regulation of purine nucleotide biosynthetic process |
|   GO:0030808 | 0.000436807598019 | 0.6 | PDK3 PDK1 PDK2 | regulation of nucleotide biosynthetic process |
|   GO:0006163 | 0.000586751252526 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | purine nucleotide metabolic process |
|   GO:0072521 | 0.000721513819175 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | purine-containing compound metabolic process |
|   GO:0005759 | 0.000778003322929 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | mitochondrial matrix |
|   GO:0032787 | 0.000890730616832 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | monocarboxylic acid metabolic process |
|   KEGG:05415 | 0.000905384445946 | 0.6 | PDK3 PDHA1 PDK2 | Diabetic cardiomyopathy |
|   GO:0009117 | 0.000934818284299 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | nucleotide metabolic process |
|   HP:0500231 | 0.000961529670085 | 0.4 | PDHX PDHA1 | Abnormal CSF pyruvate family amino acid concentration |
|   GO:0006753 | 0.00100420679152 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | nucleoside phosphate metabolic process |
|   GO:0090407 | 0.00109030437564 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | organophosphate biosynthetic process |
|   WP:WP4206 | 0.0011148137474 | 0.4 | PDHA1 PDK1 | Hereditary leiomyomatosis and renal cell carcinoma pathway |
|   GO:0055086 | 0.00183357328508 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | nucleobase-containing small molecule metabolic process |
|   GO:1901137 | 0.00205545864443 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | carbohydrate derivative biosynthetic process |
|   HP:0002928 | 0.00288300984678 | 0.4 | PDHX PDHA1 | Decreased activity of the pyruvate dehydrogenase complex |
|   REAC:R-HSA-1430728 | 0.00423241276191 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | Metabolism |
|   WP:WP5220 | 0.00433647105223 | 0.4 | PDHX PDHA1 | Metabolic reprogramming in pancreatic cancer |
|   REAC:R-HSA-389661 | 0.00454605723789 | 0.4 | PDHX PDHA1 | Glyoxylate metabolism and glycine degradation |
|   GO:0097411 | 0.00468200720083 | 0.4 | PDK3 PDK1 | hypoxia-inducible factor-1alpha signaling pathway |
|   GO:0019752 | 0.00618316242146 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | carboxylic acid metabolic process |
|   GO:0043436 | 0.00698585237284 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | oxoacid metabolic process |
|   GO:0006082 | 0.00709889029368 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | organic acid metabolic process |
|   HP:0500184 | 0.00768171284681 | 0.4 | PDHX PDHA1 | Abnormal CSF amino acid concentration |
|   REAC:R-HSA-162582 | 0.00823431736973 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | Signal Transduction |
|   HP:0500183 | 0.00870474912182 | 0.4 | PDHX PDHA1 | Abnormal CSF carboxylic acid concentration |
|   GO:0043604 | 0.00918533309693 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | amide biosynthetic process |
|   KEGG:05230 | 0.00996128881886 | 0.4 | PDHA1 PDK1 | Central carbon metabolism in cancer |
|   GO:0019637 | 0.0162053403278 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | organophosphate metabolic process |
|   WP:WP3925 | 0.0197951791935 | 0.4 | PDHX PDHA1 | Amino acid metabolism |
|   KEGG:04066 | 0.0217595858915 | 0.4 | PDHA1 PDK1 | HIF-1 signaling pathway |
|   GO:1901135 | 0.0227982065196 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | carbohydrate derivative metabolic process |
|   GO:0010906 | 0.0264997162634 | 0.6 | PDK3 PDK1 PDK2 | regulation of glucose metabolic process |
|   GO:0019217 | 0.0294915925302 | 0.6 | PDK3 PDK1 PDK2 | regulation of fatty acid metabolic process |
|   GO:1900542 | 0.0310683011928 | 0.6 | PDK3 PDK1 PDK2 | regulation of purine nucleotide metabolic process |
|   GO:0006140 | 0.0327001087246 | 0.6 | PDK3 PDK1 PDK2 | regulation of nucleotide metabolic process |
|   GO:0043603 | 0.0398244546538 | 1.0 | PDHA1 PDHX PDK2 PDK1 PDK3 | amide metabolic process |
Edges
| Protein 1 | Protein 2 | Score | ProteomeHD | Interface Overlap | Evidence |
|---|---|---|---|---|---|
|  PDHA1 |  PDHB | 1.0 | 0.958           |
structurally_consistent (dimer)        
|
hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     Guru     bioplex3_WMM     Malo     gupta_WMM     fraction     boldt_WMM     treiber_WMM     |
|  PDHA1 |  DLAT | 1.0 | 0.718           |          | hein_WMM     bioplex_WMM     Guru     bioplex3_WMM     youn_WMM     fraction     |
|  PDHB |  DLAT | 1.0 | 0.694           |          | hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     Guru     bioplex3_WMM     youn_WMM     fraction     |
|  PDK3 |  DLAT | 0.999 | 0.118           |
structurally_consistent (dimer)        
|
bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     |
|  PDK1 |  PDK2 | 0.999 | 0.058           |
structurally_consistent (dimer)        
|
hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     hein ()     |
|  PDK3 |  PDK1 | 0.999 | 0.278           |
structurally_consistent (dimer)        
|
hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     hein ()     |
|  PDK3 |  PDHB | 0.999 | 0.124           |
structurally_consistent (dimer)        
|
bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     treiber_WMM     |
|  PDHX |  PDHA1 | 0.998 | 0.684           |          | hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     |
|  PDK3 |  PDHX | 0.998 | 0.06           |
structurally_consistent (dimer)        
|
bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     |
|  PDHX |  DLAT | 0.997 | 0.652           |          | hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     |
|  PDK3 |  PDHA1 | 0.997 | 0.18           |
structurally_consistent (dimer)        
|
bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     treiber_WMM     |
|  PDHA1 |  PDK2 | 0.996 | 0.204           |          | hein_WMM     bioplex_WMM     bioplex3_WMM     WMM_only     |
|  PDK3 |  PDK2 | 0.996 | 0.088           |
structurally_consistent (dimer)        
|
hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     |
|  PDK1 |  PDHA1 | 0.996 | 0.29           |          | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     |
|  PDK2 |  DLAT | 0.994 | 0.236           |
structurally_consistent (dimer)        
|
hein_WMM     bioplex_WMM     bioplex3_WMM     WMM_only     |
|  PDHX |  PDK2 | 0.994 | 0.07           |          | hein_WMM     bioplex_WMM     bioplex3_WMM     WMM_only     |
|  PDHX |  PDHB | 0.991 | 0.568           |          | hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     boldt_WMM     |
|  PDK1 |  PDHX | 0.984 | 0.218           |          | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     |
|  PDK1 |  PDHB | 0.964 | 0.429538461538           |          | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     |
|  PDHB |  PDK2 | 0.957 | 0.354           |
structurally_consistent (dimer)        
|
hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     |
|  PDK1 |  DLAT | 0.924 | 0.3708           |          | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     |
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