hu.MAP 3.0: Complex View
Human Protein Complex Map
Search for a protein
Complex: huMAP3_07561.1
Confidence: Very High  
ProteinsGenename | Protein Name | Uniprot Annotation Score | Links |
---|---|---|---|
SAP18 | Histone deacetylase complex subunit SAP18 (18 kDa Sin3-associated polypeptide) (2HOR0202) (Cell growth-inhibiting gene 38 protein) (Sin3-associated polypeptide p18) | 5 | UniProt   NCBI |
SNIP1 | Smad nuclear-interacting protein 1 (FHA domain-containing protein SNIP1) | 5 | UniProt   NCBI |
CCDC9 | Coiled-coil domain-containing protein 9 | 4 | UniProt   NCBI |
MAGOH | Protein mago nashi homolog | 5 | UniProt   NCBI |
EIF4A3 | Eukaryotic initiation factor 4A-III (eIF-4A-III) (eIF4A-III) (EC 3.6.4.13) (ATP-dependent RNA helicase DDX48) (ATP-dependent RNA helicase eIF4A-3) (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Eukaryotic translation initiation factor 4A isoform 3) (Nuclear matrix protein 265) (NMP 265) (hNMP 265) [Cleaved into: Eukaryotic initiation factor 4A-III, N-terminally processed] | 5 | UniProt   NCBI |
PNN | Pinin (140 kDa nuclear and cell adhesion-related phosphoprotein) (Desmosome-associated protein) (Domain-rich serine protein) (DRS protein) (DRSP) (Melanoma metastasis clone A protein) (Nuclear protein SDK3) (SR-like protein) | 5 | UniProt   NCBI |
RBM8A | RNA-binding protein 8A (Binder of OVCA1-1) (BOV-1) (RNA-binding motif protein 8A) (RNA-binding protein Y14) (Ribonucleoprotein RBM8A) | 5 | UniProt   NCBI |
Enrichments
Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
---|---|---|---|---|
  GO:0035145 | 1.00249058106e-12 | 0.857142857143 | EIF4A3 MAGOH SAP18 RBM8A CCDC9 PNN | exon-exon junction complex |
  REAC:R-HSA-72163 | 8.42500920507e-09 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | mRNA Splicing - Major Pathway |
  KEGG:03015 | 9.08932641893e-09 | 0.714285714286 | RBM8A SAP18 EIF4A3 PNN MAGOH | mRNA surveillance pathway |
  REAC:R-HSA-72172 | 1.03682214592e-08 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | mRNA Splicing |
  KEGG:03013 | 1.54636599111e-08 | 0.714285714286 | RBM8A SAP18 EIF4A3 PNN MAGOH | Nucleocytoplasmic transport |
  CORUM:754 | 2.80877722849e-08 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Exon junction complex (EIF4A3, MLN51, UPF3B, MAGOH, Y14) |
  CORUM:744 | 2.80877722849e-08 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Exon junction complex (EIF4A3, MLN51, MAGOH, Y14) |
  CORUM:740 | 2.80877722849e-08 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Exon junction complex (EIF4A3, MLN51, MAGOH, Y14) |
  CORUM:769 | 2.80877722849e-08 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Exon junction complex (EIF4A3, MLN51, MAGOH, Y14) |
  REAC:R-HSA-72203 | 5.49269500155e-08 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | Processing of Capped Intron-Containing Pre-mRNA |
  CORUM:755 | 7.02050133195e-08 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Exon junction complex (EIF4A3, MLN51, UPF3B, MAGOH, Y14, PYM) |
  CORUM:6742 | 1.4038119659e-07 | 0.428571428571 | MAGOH RBM8A EIF4A3 | SMG1-UPF2-Y14-MAGOH-UPF3B-EIF4A3 complex |
  CORUM:785 | 2.45616649736e-07 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Exon junction complex |
  CORUM:1181 | 2.57078286488e-06 | 0.571428571429 | RBM8A MAGOH PNN EIF4A3 | C complex spliceosome |
  GO:0000398 | 1.18487839663e-05 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | mRNA splicing, via spliceosome |
  GO:0000377 | 1.18487839663e-05 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile |
  GO:0000375 | 1.29667426464e-05 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | RNA splicing, via transesterification reactions |
  REAC:R-HSA-8953854 | 1.34047597764e-05 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | Metabolism of RNA |
  CORUM:763 | 2.05265451394e-05 | 0.285714285714 | MAGOH RBM8A | Y14-Magoh complex |
  CORUM:773 | 2.05265451394e-05 | 0.285714285714 | MAGOH RBM8A | Y14-Magoh complex |
  GO:0006397 | 4.76399408567e-05 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | mRNA processing |
  CORUM:1293 | 6.1565588648e-05 | 0.285714285714 | MAGOH RBM8A | IPO13-RBM8A-MAGOH complex |
  GO:0008380 | 8.11796570198e-05 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | RNA splicing |
  GO:0005681 | 0.000206894724857 | 0.714285714286 | RBM8A MAGOH PNN SNIP1 EIF4A3 | spliceosomal complex |
  REAC:R-HSA-72187 | 0.0003384553812 | 0.428571428571 | MAGOH RBM8A EIF4A3 | mRNA 3'-end processing |
  REAC:R-HSA-73856 | 0.000511465276813 | 0.428571428571 | MAGOH RBM8A EIF4A3 | RNA Polymerase II Transcription Termination |
  GO:2000622 | 0.000554182028596 | 0.428571428571 | MAGOH RBM8A EIF4A3 | regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
  GO:0140513 | 0.000698274170384 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | nuclear protein-containing complex |
  REAC:R-HSA-159236 | 0.000704018847769 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Transport of Mature mRNA derived from an Intron-Containing Transcript |
  GO:0016071 | 0.000979013104412 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | mRNA metabolic process |
  REAC:R-HSA-72202 | 0.00101516292409 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Transport of Mature Transcript to Cytoplasm |
  KEGG:03040 | 0.00108816732534 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Spliceosome |
  GO:0071013 | 0.00202210317171 | 0.571428571429 | RBM8A MAGOH PNN EIF4A3 | catalytic step 2 spliceosome |
  CORUM:351 | 0.00286422017167 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Spliceosome |
  REAC:R-HSA-927802 | 0.00306472559835 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Nonsense-Mediated Decay (NMD) |
  REAC:R-HSA-975957 | 0.00306472559835 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) |
  HPA:0570791 | 0.00308516623972 | 0.857142857143 | EIF4A3 SNIP1 SAP18 RBM8A CCDC9 PNN | testis; round or early spermatids[>=Low] |
  HPA:0130202 | 0.00318818628688 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | colon; endothelial cells[>=Medium] |
  HPA:0460672 | 0.00330462389769 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | skin 1; melanocytes[>=Medium] |
  HPA:0570772 | 0.00351231978593 | 0.571428571429 | RBM8A EIF4A3 SNIP1 PNN | testis; peritubular cells[>=Medium] |
  GO:0003723 | 0.00365068293209 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | RNA binding |
  HPA:0080122 | 0.00518153953053 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | caudate; glial cells[>=Medium] |
  HPA:0010011 | 0.00535028790023 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | adipose tissue; adipocytes[>=Low] |
  HPA:0010000 | 0.00535028790023 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | adipose tissue |
  HPA:0301372 | 0.00580454207605 | 0.714285714286 | RBM8A SAP18 PNN CCDC9 EIF4A3 | lung; alveolar cells type II[>=Medium] |
  HP:0009486 | 0.00598974417902 | 0.285714285714 | EIF4A3 RBM8A | Radial deviation of the hand |
  HPA:0620222 | 0.00635889715139 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | vagina; squamous epithelial cells[>=Medium] |
  GO:0006396 | 0.00685712478237 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | RNA processing |
  HPA:0570801 | 0.00793021341268 | 0.857142857143 | EIF4A3 SNIP1 SAP18 RBM8A CCDC9 PNN | testis; sertoli cells[>=Low] |
  HPA:0570773 | 0.0079666924392 | 0.428571428571 | EIF4A3 SNIP1 RBM8A | testis; peritubular cells[High] |
  HPA:0570813 | 0.00903917598725 | 0.714285714286 | RBM8A EIF4A3 PNN SNIP1 CCDC9 | testis; spermatogonia cells[High] |
  REAC:R-HSA-9010553 | 0.00943980481067 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Regulation of expression of SLITs and ROBOs |
  HPA:0080123 | 0.0105779971796 | 0.571428571429 | SAP18 EIF4A3 RBM8A MAGOH | caudate; glial cells[High] |
  HPA:0570771 | 0.0113999127794 | 0.571428571429 | RBM8A EIF4A3 SNIP1 PNN | testis; peritubular cells[>=Low] |
  HPA:0100122 | 0.0121923236822 | 0.857142857143 | EIF4A3 SNIP1 MAGOH SAP18 RBM8A PNN | cerebral cortex; glial cells[>=Medium] |
  HPA:0600223 | 0.0128006144006 | 0.714285714286 | RBM8A SAP18 EIF4A3 PNN MAGOH | tonsil; squamous epithelial cells[High] |
  HPA:0080121 | 0.0135544012025 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | caudate; glial cells[>=Low] |
  HPA:0090183 | 0.014905435517 | 0.571428571429 | RBM8A MAGOH PNN EIF4A3 | cerebellum; cells in granular layer[High] |
  HPA:0100201 | 0.0154029798657 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | cerebral cortex; endothelial cells[>=Low] |
  HPA:0301371 | 0.0166031206858 | 0.714285714286 | RBM8A SAP18 PNN CCDC9 EIF4A3 | lung; alveolar cells type II[>=Low] |
  GO:0000184 | 0.0182422971773 | 0.428571428571 | MAGOH RBM8A EIF4A3 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
  HPA:0320102 | 0.0187790608236 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | nasopharynx; respiratory epithelial cells[>=Medium] |
  REAC:R-HSA-376176 | 0.0190108932455 | 0.428571428571 | MAGOH RBM8A EIF4A3 | Signaling by ROBO receptors |
  HPA:0570811 | 0.0191101015746 | 0.857142857143 | EIF4A3 SNIP1 SAP18 RBM8A CCDC9 PNN | testis; spermatogonia cells[>=Low] |
  WP:WP5362 | 0.0207233783056 | 0.285714285714 | MAGOH EIF4A3 | TAR syndrome |
  HPA:0100121 | 0.0225892797348 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | cerebral cortex; glial cells[>=Low] |
  HPA:0570792 | 0.02454917637 | 0.714285714286 | RBM8A SAP18 PNN SNIP1 EIF4A3 | testis; round or early spermatids[>=Medium] |
  HPA:0600222 | 0.0259260211515 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | tonsil; squamous epithelial cells[>=Medium] |
  HPA:0530712 | 0.0280168441993 | 0.857142857143 | EIF4A3 MAGOH SAP18 RBM8A CCDC9 PNN | spleen; cells in red pulp[>=Medium] |
  HPA:0570781 | 0.0284194718187 | 0.714285714286 | RBM8A SAP18 PNN CCDC9 EIF4A3 | testis; preleptotene spermatocytes[>=Low] |
  HPA:0190222 | 0.0294038225527 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | esophagus; squamous epithelial cells[>=Medium] |
  GO:1903503 | 0.0294899169624 | 0.285714285714 | MAGOH RBM8A | ATPase inhibitor complex |
  GO:1990501 | 0.0294899169624 | 0.285714285714 | MAGOH RBM8A | exon-exon junction subcomplex mago-y14 |
  HPA:0270351 | 0.0313594015773 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | kidney; cells in glomeruli[>=Low] |
  HPA:0320103 | 0.0318090001371 | 0.714285714286 | RBM8A SAP18 EIF4A3 PNN MAGOH | nasopharynx; respiratory epithelial cells[High] |
  HPA:0301362 | 0.0322525779597 | 0.571428571429 | RBM8A SAP18 PNN EIF4A3 | lung; alveolar cells type I[>=Medium] |
  HPA:0570802 | 0.0328468260001 | 0.714285714286 | RBM8A SAP18 PNN SNIP1 EIF4A3 | testis; sertoli cells[>=Medium] |
  HPA:0570793 | 0.0331675907289 | 0.571428571429 | RBM8A EIF4A3 SNIP1 PNN | testis; round or early spermatids[High] |
  HPA:0510000 | 0.0340880803824 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | soft tissue 2 |
  HPA:0060103 | 0.0350017722259 | 0.714285714286 | RBM8A SAP18 EIF4A3 PNN MAGOH | bronchus; respiratory epithelial cells[High] |
  HPA:0180053 | 0.0350017722259 | 0.714285714286 | RBM8A SAP18 EIF4A3 PNN MAGOH | epididymis; glandular cells[High] |
  HPA:0100133 | 0.0357100891892 | 0.714285714286 | RBM8A SAP18 EIF4A3 PNN MAGOH | cerebral cortex; neuronal cells[High] |
  HPA:0460671 | 0.0393979445648 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | skin 1; melanocytes[>=Low] |
  HPA:0350472 | 0.041116897218 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | pancreas; exocrine glandular cells[>=Medium] |
  HPA:0500000 | 0.0416022514789 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | soft tissue 1 |
  HPA:0490000 | 0.0470701914608 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | smooth muscle |
  HPA:0490691 | 0.0470701914608 | 1.0 | EIF4A3 SNIP1 MAGOH SAP18 PNN CCDC9 RBM8A | smooth muscle; smooth muscle cells[>=Low] |
  GO:0000381 | 0.0473277551461 | 0.428571428571 | SAP18 RBM8A MAGOH | regulation of alternative mRNA splicing, via spliceosome |
  HPA:0250122 | 0.0487753888962 | 0.714285714286 | RBM8A SAP18 PNN SNIP1 EIF4A3 | hippocampus; glial cells[>=Medium] |
  HP:0006492 | 0.0497326121949 | 0.285714285714 | EIF4A3 RBM8A | Aplasia/Hypoplasia of the fibula |
Edges
Protein 1 | Protein 2 | Score | ProteomeHD | Evidence |
---|---|---|---|---|
 CCDC9 |  EIF4A3 | 1.0 | 0.1           | hein_WMM     bioplex3_HEK293     bioplex_WMM     bioplex3_WMM     youn_WMM     hein ()     |
 MAGOH |  RBM8A | 1.0 |            | hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     hein ()     bioplex3_HCT116     gupta_WMM     treiber_WMM     |
 RBM8A |  CCDC9 | 0.999 | 0.184           | hein_WMM     bioplex3_HEK293     bioplex_WMM     bioplex3_WMM     youn_WMM     hein ()     |
 PNN |  RBM8A | 0.999 | 0.874           | hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     hein ()     bioplex3_HCT116     gupta_WMM     treiber_WMM     |
 PNN |  CCDC9 | 0.999 | 0.158           | hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     hein ()     |
 PNN |  SAP18 | 0.999 |            | hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     bioplex3_HCT116     gupta_WMM     fraction     |
 MAGOH |  CCDC9 | 0.998 |            | hein_WMM     bioplex3_HEK293     bioplex_WMM     bioplex3_WMM     youn_WMM     WMM_only     |
 CCDC9 |  SAP18 | 0.998 |            | hein_WMM     bioplex3_HEK293     bioplex_WMM     bioplex3_WMM     youn_WMM     hein ()     bioplex3_HCT116     |
 EIF4A3 |  SNIP1 | 0.998 | 0.506           | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     bioplex3_HCT116     |
 PNN |  EIF4A3 | 0.996 | 0.896           | hein_WMM     youn ()     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     bioplex3_HCT116     gupta_WMM     treiber_WMM     |
 MAGOH |  SNIP1 | 0.99 |            | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     bioplex3_HCT116     |
 PNN |  SNIP1 | 0.989 | 0.442           | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     bioplex3_HCT116     |
 EIF4A3 |  SAP18 | 0.987 |            | hein_WMM     youn ()     bioplex3_HEK293     bioplex_WMM     bioplex3_WMM     youn_WMM     bioplex3_HCT116     gupta_WMM     fraction     |
 CCDC9 |  SNIP1 | 0.987 | 0.076           | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     bioplex3_HCT116     |
 RBM8A |  SNIP1 | 0.985 | 0.494           | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     bioplex3_HCT116     |
 MAGOH |  PNN | 0.982 |            | hein_WMM     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     bioplex3_HCT116     gupta_WMM     treiber_WMM     |
 MAGOH |  EIF4A3 | 0.978 |            | hein_WMM     youn ()     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     bioplex3_HCT116     gupta_WMM     |
 RBM8A |  SAP18 | 0.972 |            | hein_WMM     bioplex3_HEK293     bioplex_WMM     bioplex3_WMM     youn_WMM     bioplex3_HCT116     WMM_only     |
 RBM8A |  EIF4A3 | 0.951 | 0.89           | hein_WMM     youn ()     bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     hein ()     bioplex3_HCT116     gupta_WMM     |
 MAGOH |  SAP18 | 0.95 |            | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     youn_WMM     bioplex3_HCT116     |
 SNIP1 |  SAP18 | 0.194 |            | bioplex3_HEK293     bioplex ()     bioplex_WMM     bioplex3_WMM     bioplex3_HCT116     |
Related Complexes