hu.MAP 3.0: Complex View
Human Protein Complex Map
Search for a protein
Complex: huMAP3_10098.1
Complex Portal: CPX-23689
Confidence: Medium High  
ProteinsGenename | Protein Name | Uniprot Annotation Score | Links |
---|---|---|---|
SAFB | Scaffold attachment factor B1 (SAF-B) (SAF-B1) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE-TATA-binding protein) | 5 | UniProt   NCBI |
KHDRBS1 | KH domain-containing, RNA-binding, signal transduction-associated protein 1 (GAP-associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p21 Ras GTPase-activating protein-associated p62) (p68) | 5 | UniProt   NCBI |
YLPM1 | YLP motif-containing protein 1 (Nuclear protein ZAP3) (ZAP113) | 4 | UniProt   NCBI |
DDX17 | Probable ATP-dependent RNA helicase DDX17 (EC 3.6.4.13) (DEAD box protein 17) (DEAD box protein p72) (DEAD box protein p82) (RNA-dependent helicase p72) | 5 | UniProt   NCBI |
RBM12B | RNA-binding protein 12B (RNA-binding motif protein 12B) | 3 | UniProt   NCBI |
PPHLN1 | Periphilin-1 (CDC7 expression repressor) (CR) (Gastric cancer antigen Ga50) | 5 | UniProt   NCBI |
KLF13 | Krueppel-like factor 13 (Basic transcription element-binding protein 3) (BTE-binding protein 3) (Novel Sp1-like zinc finger transcription factor 1) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Transcription factor BTEB3) (Transcription factor NSLP1) | 5 | UniProt   NCBI |
RBM3 | RNA-binding protein 3 (RNA-binding motif protein 3) (RNPL) | 5 | UniProt   NCBI |
NCOA5 | Nuclear receptor coactivator 5 (NCoA-5) (Coactivator independent of AF-2) (CIA) | 5 | UniProt   NCBI |
RBM6 | RNA-binding protein 6 (Lung cancer antigen NY-LU-12) (Protein G16) (RNA-binding motif protein 6) (RNA-binding protein DEF-3) | 5 | UniProt   NCBI |
SAFB2 | Scaffold attachment factor B2 (SAF-B2) | 5 | UniProt   NCBI |
CAPN13 | Calpain-13 (EC 3.4.22.-) (Calcium-activated neutral proteinase 13) (CANP 13) | 3 | UniProt   NCBI |
RBMXL1 | RNA binding motif protein, X-linked-like-1 (Heterogeneous nuclear ribonucleoprotein G-like 1) | 3 | UniProt   NCBI |
HNRNPK | Heterogeneous nuclear ribonucleoprotein K (hnRNP K) (Transformation up-regulated nuclear protein) (TUNP) | 5 | UniProt   NCBI |
SLTM | SAFB-like transcription modulator (Modulator of estrogen-induced transcription) | 5 | UniProt   NCBI |
ZNF638 | Zinc finger protein 638 (Cutaneous T-cell lymphoma-associated antigen se33-1) (CTCL-associated antigen se33-1) (Nuclear protein 220) (Zinc finger matrin-like protein) | 5 | UniProt   NCBI |
CCDC70 | Coiled-coil domain-containing protein 70 | 4 | UniProt   NCBI |
Enrichments
Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
---|---|---|---|---|
  GO:0050684 | 6.23591386666e-09 | 0.470588235294 | SAFB2 RBMXL1 KHDRBS1 SAFB RBM3 HNRNPK SLTM DDX17 | regulation of mRNA processing |
  GO:0003723 | 1.32938721742e-07 | 0.823529411765 | SLTM RBM12B NCOA5 SAFB2 KHDRBS1 SAFB ZNF638 RBM6 RBM3 HNRNPK YLPM1 RBMXL1 DDX17 PPHLN1 | RNA binding |
  GO:0006397 | 1.62368941694e-06 | 0.529411764706 | SAFB2 RBMXL1 KHDRBS1 SAFB RBM3 HNRNPK SLTM DDX17 RBM6 | mRNA processing |
  GO:0006396 | 3.59148788191e-06 | 0.647058823529 | RBM12B SAFB2 KHDRBS1 SAFB ZNF638 RBM3 HNRNPK SLTM RBMXL1 DDX17 RBM6 | RNA processing |
  GO:1903311 | 4.87137096388e-06 | 0.470588235294 | SAFB2 RBMXL1 KHDRBS1 SAFB RBM3 HNRNPK SLTM DDX17 | regulation of mRNA metabolic process |
  GO:0043484 | 1.22613359146e-05 | 0.411764705882 | RBM12B RBM3 KHDRBS1 ZNF638 RBMXL1 HNRNPK DDX17 | regulation of RNA splicing |
  GO:0003676 | 6.19986633157e-05 | 0.882352941176 | SLTM RBM12B NCOA5 SAFB2 KHDRBS1 SAFB ZNF638 KLF13 RBM3 HNRNPK RBM6 YLPM1 RBMXL1 DDX17 PPHLN1 | nucleic acid binding |
  HPA:0301363 | 8.35705079388e-05 | 0.411764705882 | HNRNPK SLTM SAFB ZNF638 KHDRBS1 DDX17 RBM6 | lung; alveolar cells type I[High] |
  HPA:0301361 | 8.39579962739e-05 | 0.529411764706 | HNRNPK ZNF638 KHDRBS1 SAFB PPHLN1 RBM3 SLTM DDX17 RBM6 | lung; alveolar cells type I[>=Low] |
  GO:0016071 | 0.000140378370034 | 0.529411764706 | SAFB2 RBMXL1 KHDRBS1 SAFB RBM3 HNRNPK SLTM DDX17 RBM6 | mRNA metabolic process |
  GO:0008380 | 0.000143078425542 | 0.470588235294 | RBM12B RBM3 KHDRBS1 ZNF638 RBMXL1 HNRNPK DDX17 RBM6 | RNA splicing |
  HPA:0090193 | 0.000246990696176 | 0.470588235294 | SAFB2 HNRNPK KHDRBS1 SAFB ZNF638 RBMXL1 SLTM RBM6 | cerebellum; cells in molecular layer[High] |
  HPA:0301362 | 0.000251559858024 | 0.470588235294 | HNRNPK ZNF638 KHDRBS1 SAFB RBM3 SLTM DDX17 RBM6 | lung; alveolar cells type I[>=Medium] |
  HPA:0570782 | 0.000533450271061 | 0.529411764706 | HNRNPK RBM3 KHDRBS1 SAFB ZNF638 PPHLN1 RBMXL1 SLTM RBM6 | testis; preleptotene spermatocytes[>=Medium] |
  HPA:0301373 | 0.000543033373186 | 0.411764705882 | HNRNPK SLTM SAFB ZNF638 KHDRBS1 DDX17 RBM6 | lung; alveolar cells type II[High] |
  TF:M08322 | 0.00130441648129 | 0.176470588235 | SAFB2 SAFB SLTM | Factor: GCMa:OC-2; motif: ATGCGGGNAATCGATN |
  HPA:0610833 | 0.00136303479978 | 0.588235294118 | SAFB2 HNRNPK KHDRBS1 SAFB ZNF638 PPHLN1 RBMXL1 SLTM DDX17 RBM6 | urinary bladder; urothelial cells[High] |
  GO:0097159 | 0.00136608224151 | 0.882352941176 | SLTM RBM12B NCOA5 SAFB2 KHDRBS1 SAFB ZNF638 KLF13 RBM3 HNRNPK RBM6 YLPM1 RBMXL1 DDX17 PPHLN1 | organic cyclic compound binding |
  HPA:0301371 | 0.00154487614559 | 0.529411764706 | HNRNPK ZNF638 KHDRBS1 SAFB PPHLN1 RBM3 SLTM DDX17 RBM6 | lung; alveolar cells type II[>=Low] |
  GO:0048024 | 0.00162945508557 | 0.294117647059 | RBMXL1 KHDRBS1 RBM3 HNRNPK DDX17 | regulation of mRNA splicing, via spliceosome |
  HPA:0130243 | 0.00232686334834 | 0.411764705882 | HNRNPK ZNF638 KHDRBS1 SAFB RBMXL1 SLTM PPHLN1 | colon; peripheral nerve/ganglion[High] |
  HPA:0301372 | 0.0030301847606 | 0.470588235294 | HNRNPK ZNF638 KHDRBS1 SAFB RBM3 SLTM DDX17 RBM6 | lung; alveolar cells type II[>=Medium] |
  HPA:0570763 | 0.00317683427195 | 0.411764705882 | HNRNPK SLTM SAFB ZNF638 KHDRBS1 DDX17 PPHLN1 | testis; pachytene spermatocytes[High] |
  HPA:0380202 | 0.00318118653483 | 0.294117647059 | SLTM KHDRBS1 HNRNPK PPHLN1 DDX17 | placenta; endothelial cells[>=Medium] |
  HPA:0570793 | 0.00360495843546 | 0.411764705882 | HNRNPK SLTM SAFB ZNF638 KHDRBS1 DDX17 PPHLN1 | testis; round or early spermatids[High] |
  HPA:0570781 | 0.00385943299314 | 0.529411764706 | HNRNPK RBM3 KHDRBS1 SAFB ZNF638 PPHLN1 RBMXL1 SLTM RBM6 | testis; preleptotene spermatocytes[>=Low] |
  HPA:0340463 | 0.00640453415704 | 0.294117647059 | RBMXL1 KHDRBS1 HNRNPK SAFB RBM6 | ovary; ovarian stroma cells[High] |
  HPA:0460673 | 0.00676882583321 | 0.411764705882 | HNRNPK ZNF638 KHDRBS1 SAFB RBMXL1 SLTM RBM6 | skin 1; melanocytes[High] |
  HPA:0380201 | 0.00770833478676 | 0.294117647059 | SLTM KHDRBS1 HNRNPK PPHLN1 DDX17 | placenta; endothelial cells[>=Low] |
  HPA:0381192 | 0.00898247232153 | 0.294117647059 | SLTM KHDRBS1 HNRNPK PPHLN1 DDX17 | placenta; cytotrophoblasts[>=Medium] |
  HPA:0570783 | 0.00971784612113 | 0.352941176471 | HNRNPK KHDRBS1 SAFB RBMXL1 SLTM PPHLN1 | testis; preleptotene spermatocytes[High] |
  HPA:0600223 | 0.00993190378936 | 0.470588235294 | SAFB2 HNRNPK KHDRBS1 SAFB ZNF638 RBMXL1 SLTM RBM6 | tonsil; squamous epithelial cells[High] |
  HPA:0400053 | 0.0118503743708 | 0.588235294118 | SAFB2 HNRNPK KHDRBS1 SAFB ZNF638 PPHLN1 RBMXL1 SLTM DDX17 RBM6 | rectum; glandular cells[High] |
  HPA:0160253 | 0.0121595791076 | 0.294117647059 | RBMXL1 KHDRBS1 HNRNPK SAFB RBM6 | endometrium 1; cells in endometrial stroma[High] |
  HPA:0090183 | 0.0125157084428 | 0.352941176471 | HNRNPK RBMXL1 SLTM SAFB ZNF638 KHDRBS1 | cerebellum; cells in granular layer[High] |
  HPA:0080133 | 0.012982568103 | 0.411764705882 | HNRNPK SAFB2 KHDRBS1 SAFB ZNF638 RBMXL1 SLTM | caudate; neuronal cells[High] |
  HPA:0620223 | 0.0148835762569 | 0.411764705882 | SAFB2 HNRNPK KHDRBS1 SAFB RBMXL1 SLTM RBM6 | vagina; squamous epithelial cells[High] |
  HPA:0381191 | 0.0149405924207 | 0.294117647059 | SLTM KHDRBS1 HNRNPK PPHLN1 DDX17 | placenta; cytotrophoblasts[>=Low] |
  GO:0000398 | 0.0179677330179 | 0.352941176471 | HNRNPK RBM3 KHDRBS1 RBMXL1 DDX17 RBM6 | mRNA splicing, via spliceosome |
  GO:0000377 | 0.0179677330179 | 0.352941176471 | HNRNPK RBM3 KHDRBS1 RBMXL1 DDX17 RBM6 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile |
  HPA:0630053 | 0.0190397018538 | 0.411764705882 | SAFB2 HNRNPK KHDRBS1 SAFB RBMXL1 SLTM RBM6 | cervix; glandular cells[High] |
  GO:0000375 | 0.019616373026 | 0.352941176471 | HNRNPK RBM3 KHDRBS1 RBMXL1 DDX17 RBM6 | RNA splicing, via transesterification reactions |
  HPA:0300201 | 0.0220844639817 | 0.352941176471 | HNRNPK SLTM SAFB RBM3 KHDRBS1 RBM6 | lung; endothelial cells[>=Low] |
  HPA:0380513 | 0.0241081371649 | 0.411764705882 | SLTM SAFB PPHLN1 ZNF638 KHDRBS1 DDX17 RBM6 | placenta; decidual cells[High] |
  HPA:0570792 | 0.0260817110646 | 0.470588235294 | HNRNPK CCDC70 SLTM SAFB ZNF638 KHDRBS1 DDX17 PPHLN1 | testis; round or early spermatids[>=Medium] |
  HPA:0510653 | 0.0270930479487 | 0.294117647059 | SLTM KHDRBS1 HNRNPK SAFB RBMXL1 | soft tissue 2; fibroblasts[High] |
  GO:0019219 | 0.0284712701129 | 0.764705882353 | SLTM RBM12B NCOA5 SAFB2 KHDRBS1 SAFB ZNF638 RBM3 HNRNPK YLPM1 RBMXL1 DDX17 KLF13 | regulation of nucleobase-containing compound metabolic process |
  HPA:0460643 | 0.0363007766791 | 0.294117647059 | SLTM RBMXL1 RBM6 SAFB PPHLN1 | skin 1; Langerhans[High] |
  HPA:0381193 | 0.0369265847277 | 0.235294117647 | SLTM KHDRBS1 PPHLN1 HNRNPK | placenta; cytotrophoblasts[High] |
  HPA:0300203 | 0.0374508631753 | 0.235294117647 | KHDRBS1 HNRNPK SAFB RBM6 | lung; endothelial cells[High] |
  HPA:0320103 | 0.0381630199053 | 0.470588235294 | SAFB2 HNRNPK KHDRBS1 SAFB ZNF638 RBMXL1 SLTM DDX17 | nasopharynx; respiratory epithelial cells[High] |
  HPA:0170053 | 0.0429673538796 | 0.411764705882 | SAFB2 HNRNPK KHDRBS1 SAFB RBMXL1 SLTM RBM6 | endometrium 2; glandular cells[High] |
  HPA:0570803 | 0.0445564151386 | 0.294117647059 | RBMXL1 KHDRBS1 HNRNPK SAFB RBM6 | testis; sertoli cells[High] |
  HPA:0100133 | 0.0452016070031 | 0.470588235294 | SAFB2 HNRNPK KHDRBS1 SAFB ZNF638 RBMXL1 SLTM RBM6 | cerebral cortex; neuronal cells[High] |
  HPA:0570812 | 0.0465435168231 | 0.529411764706 | HNRNPK RBM3 KHDRBS1 SAFB ZNF638 PPHLN1 RBMXL1 SLTM RBM6 | testis; spermatogonia cells[>=Medium] |
  HPA:0130053 | 0.0494344649114 | 0.529411764706 | SAFB2 HNRNPK KHDRBS1 SAFB ZNF638 PPHLN1 RBMXL1 SLTM RBM6 | colon; glandular cells[High] |
  CORUM:2578 | 0.0497089104684 | 0.0588235294118 | KHDRBS1 | Sam68-p120GAP complex |
Edges
Protein 1 | Protein 2 | Score | ProteomeHD | Interface Overlap |
---|---|---|---|---|
 SAFB2 |  SAFB | 0.998 | 0.73           |          |
 RBM6 |  SAFB2 | 0.997 | 0.162           |          |
 RBM3 |  RBM6 | 0.997 | 0.034           |          |
 KHDRBS1 |  HNRNPK | 0.997 | 0.638           |          |
 PPHLN1 |  SAFB2 | 0.994 | 0.332           |          |
 SLTM |  RBM6 | 0.994 | 0.254           |          |
 PPHLN1 |  NCOA5 | 0.993 | 0.126           |          |
 DDX17 |  KHDRBS1 | 0.992 | 0.658           |          |
 PPHLN1 |  SAFB | 0.992 | 0.426           |          |
 NCOA5 |  RBMXL1 | 0.992 | 0.172           |          |
 SLTM |  PPHLN1 | 0.992 | 0.276           |          |
 NCOA5 |  SAFB2 | 0.991 | 0.336           |          |
 SLTM |  NCOA5 | 0.991 | 0.248           |          |
 NCOA5 |  SAFB | 0.991 | 0.262           |          |
 SLTM |  HNRNPK | 0.991 | 0.336           |          |
 RBM6 |  NCOA5 | 0.99 | 0.08           |          |
 SLTM |  SAFB | 0.99 | 0.39           |          |
 RBM6 |  RBMXL1 | 0.989 | 0.136           |          |
 SLTM |  YLPM1 | 0.989 | 0.422           |          |
 PPHLN1 |  ZNF638 | 0.988 | 0.158           |          |
 SLTM |  RBM12B | 0.988 | 0.436           |          |
 PPHLN1 |  RBM6 | 0.987 | 0.09           |          |
 RBM6 |  KHDRBS1 | 0.987 | 0.136           |          |
 RBM6 |  ZNF638 | 0.986 | 0.218           |          |
 KLF13 |  RBM3 | 0.986 | 0.048           |          |
 ZNF638 |  NCOA5 | 0.985 | 0.146           |          |
 YLPM1 |  RBMXL1 | 0.985 | 0.114           |          |
 RBM12B |  NCOA5 | 0.982 | 0.204           |          |
 RBMXL1 |  HNRNPK | 0.981 | 0.094           |          |
 PPHLN1 |  RBMXL1 | 0.981 | 0.056           |          |
 SLTM |  SAFB2 | 0.98 | 0.42           |          |
 KLF13 |  SLTM | 0.979 | 0.04           |          |
 SAFB2 |  HNRNPK | 0.979 | 0.374           |          |
 RBM12B |  RBM6 | 0.978 | 0.084           |          |
 SLTM |  CCDC70 | 0.978 |            |          |
 SAFB |  KHDRBS1 | 0.977 | 0.66           |          |
 YLPM1 |  RBM6 | 0.976 | 0.1           |          |
 YLPM1 |  SAFB2 | 0.976 | 0.136           |          |
 CAPN13 |  SAFB2 | 0.972 |            |          |
 RBM3 |  SLTM | 0.972 | 0.044           |          |
 ZNF638 |  SAFB | 0.972 | 0.304           |          |
 SLTM |  RBMXL1 | 0.971 | 0.128           |          |
 KLF13 |  RBM6 | 0.969 | 0.05           |          |
 CAPN13 |  SAFB | 0.968 |            |          |
 RBM6 |  SAFB | 0.968 | 0.438           |          |
 RBMXL1 |  SAFB | 0.967 | 0.092           |          |
 SAFB2 |  KHDRBS1 | 0.967 | 0.25           |          |
 YLPM1 |  NCOA5 | 0.964 | 0.21           |          |
 CCDC70 |  SAFB | 0.964 |            |          |
 RBM12B |  ZNF638 | 0.963 | 0.2           |          |
 RBM6 |  DDX17 | 0.961 | 0.176           |          |
 RBM3 |  SAFB | 0.958 | 0.064           |          |
 YLPM1 |  PPHLN1 | 0.958 | 0.118           |          |
 ZNF638 |  SAFB2 | 0.953 | 0.168           |          |
 NCOA5 |  HNRNPK | 0.953 | 0.112533333333           |          |
 SLTM |  ZNF638 | 0.95 | 0.302           |          |
 ZNF638 |  RBMXL1 | 0.949 | 0.078           |          |
 RBMXL1 |  SAFB2 | 0.937 | 0.08           |          |
 RBM3 |  HNRNPK | 0.935 | 0.024           |          |
 YLPM1 |  RBM12B | 0.928 | 0.138           |          |
 RBM6 |  HNRNPK | 0.927 | 0.124           |          |
 RBM3 |  ZNF638 | 0.925 | 0.12           |          |
 NCOA5 |  KHDRBS1 | 0.924 | 0.46           |          |
 PPHLN1 |  KHDRBS1 | 0.923 | 0.144           |          |
 RBM12B |  SAFB2 | 0.92 | 0.31           |          |
 RBM12B |  HNRNPK | 0.915 | 0.124           |          |
 RBM12B |  SAFB | 0.913 | 0.196           |          |
 RBM3 |  NCOA5 | 0.905 | 0.07           |          |
 RBM12B |  PPHLN1 | 0.899 | 0.12           |          |
 YLPM1 |  SAFB | 0.894 | 0.262           |          |
 RBM3 |  RBM12B | 0.89 | 0.088           |          |
 SAFB |  HNRNPK | 0.888 | 0.574           |          |
 ZNF638 |  HNRNPK | 0.867 | 0.194           |          |
 RBMXL1 |  KHDRBS1 | 0.859 | 0.236           |          |
 YLPM1 |  HNRNPK | 0.809 | 0.082           |          |
 RBM12B |  RBMXL1 | 0.79 | 0.082           |          |
 NCOA5 |  DDX17 | 0.789 | 0.25           |          |
 SAFB2 |  DDX17 | 0.779 | 0.254           |          |
 KLF13 |  ZNF638 | 0.779 | 0.078           |          |
 RBM3 |  KHDRBS1 | 0.774 | 0.122           |          |
 SLTM |  KHDRBS1 | 0.773 | 0.422           |          |
 RBMXL1 |  DDX17 | 0.762 | 0.298           |          |
 YLPM1 |  ZNF638 | 0.734 | 0.168           |          |
 RBM3 |  RBMXL1 | 0.724 | 0.022           |          |
 RBM3 |  SAFB2 | 0.723 | 0.036           |          |
 ZNF638 |  KHDRBS1 | 0.681 | 0.508           |          |
 SLTM |  DDX17 | 0.643 | 0.2332           |          |
 YLPM1 |  KHDRBS1 | 0.597 | 0.442           |          |
 RBM12B |  DDX17 | 0.499 | 0.244           |          |
 RBM3 |  DDX17 | 0.493 | 0.248           |          |
 RBM3 |  PPHLN1 | 0.452 | 0.026           |          |
 DDX17 |  HNRNPK | 0.446 | 0.376           |          |
 PPHLN1 |  HNRNPK | 0.431 | 0.136           |          |
 YLPM1 |  DDX17 | 0.423 | 0.378           |          |
 RBM12B |  KHDRBS1 | 0.366 | 0.212           |          |
 SAFB |  DDX17 | 0.348 | 0.342           |          |
 CAPN13 |  KHDRBS1 | 0.235 |            |          |
 KLF13 |  SAFB | 0.232 | 0.04           |          |
 KLF13 |  PPHLN1 | 0.232 | 0.058           |          |
 KLF13 |  SAFB2 | 0.232 | 0.04           |          |
 KLF13 |  NCOA5 | 0.232 | 0.058           |          |
 KLF13 |  RBM12B | 0.232 | 0.032           |          |
 KLF13 |  RBMXL1 | 0.192 | 0.116           |          |
 KLF13 |  KHDRBS1 | 0.192 | 0.0520273972603           |          |
 KLF13 |  DDX17 | 0.192 | 0.072           |          |
 KLF13 |  YLPM1 | 0.192 | 0.094           |          |
 ZNF638 |  DDX17 | 0.137 | 0.21           |          |
 RBM3 |  YLPM1 | 0.134 | 0.02           |          |
 YLPM1 |  CAPN13 | 0.111 |            |          |
 SLTM |  CAPN13 | 0.055 |            |          |
 RBMXL1 |  CAPN13 | 0.053 |            |          |
 PPHLN1 |  DDX17 | 0.034 | 0.142           |          |
 RBM3 |  CAPN13 | 0.01 |            |          |
 CAPN13 |  HNRNPK | 0.007 |            |          |
 CAPN13 |  DDX17 | 0.005 |            |          |
 CCDC70 |  DDX17 | 0.003 |            |          |
 CCDC70 |  HNRNPK | 0.002 |            |          |
Related Complexes