hu.MAP 3.0: Complex View
Human Protein Complex Map
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Complex: huMAP3_13854.1
Complex Portal: CPX-14770
Confidence: Medium  
Proteins| Genename | Protein Name | Uniprot Annotation Score | Links |
|---|---|---|---|
| H2AC4 | Histone H2A type 1-B/E (Histone H2A.2) (Histone H2A/a) (Histone H2A/m) | 5 | UniProt   NCBI |
| SSBP1 | Single-stranded DNA-binding protein, mitochondrial (Mt-SSB) (MtSSB) (PWP1-interacting protein 17) | 5 | UniProt   NCBI |
| XPC | DNA repair protein complementing XP-C cells (Xeroderma pigmentosum group C-complementing protein) (p125) | 5 | UniProt   NCBI |
| HLTF | Helicase-like transcription factor (EC 2.3.2.27) (EC 3.6.4.-) (DNA-binding protein/plasminogen activator inhibitor 1 regulator) (HIP116) (RING finger protein 80) (RING-type E3 ubiquitin transferase HLTF) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3) | 5 | UniProt   NCBI |
| CLEC1B | C-type lectin domain family 1 member B (C-type lectin-like receptor 2) (CLEC-2) | 5 | UniProt   NCBI |
| RPA3 | Replication protein A 14 kDa subunit (RP-A p14) (Replication factor A protein 3) (RF-A protein 3) | 5 | UniProt   NCBI |
| APLF | Aprataxin and PNK-like factor (EC 3.1.-.-) (Apurinic-apyrimidinic endonuclease APLF) (PNK and APTX-like FHA domain-containing protein) (XRCC1-interacting protein 1) | 5 | UniProt   NCBI |
| HMGN4 | High mobility group nucleosome-binding domain-containing protein 4 (Non-histone chromosomal protein HMG-17-like 3) (Non-histone chromosomal protein) | 3 | UniProt   NCBI |
| HMCES | Abasic site processing protein HMCES (EC 4.-.-.-) (Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein) (ES cell-specific 5hmC-binding protein) (Peptidase HMCES) (EC 3.4.-.-) (SRAP domain-containing protein 1) | 5 | UniProt   NCBI |
| PNKP | Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)] | 5 | UniProt   NCBI |
| RPA4 | Replication protein A 30 kDa subunit (RP-A p30) (Replication factor A protein 4) (RF-A protein 4) | 5 | UniProt   NCBI |
| SSRP1 | FACT complex subunit SSRP1 (Chromatin-specific transcription elongation factor 80 kDa subunit) (Facilitates chromatin transcription complex 80 kDa subunit) (FACT 80 kDa subunit) (FACTp80) (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) (Structure-specific recognition protein 1) (hSSRP1) (T160) | 5 | UniProt   NCBI |
| RPA2 | Replication protein A 32 kDa subunit (RP-A p32) (Replication factor A protein 2) (RF-A protein 2) (Replication protein A 34 kDa subunit) (RP-A p34) | 5 | UniProt   NCBI |
| RNF146 | E3 ubiquitin-protein ligase RNF146 (EC 2.3.2.27) (Dactylidin) (Iduna) (RING finger protein 146) (RING-type E3 ubiquitin transferase RNF146) | 5 | UniProt   NCBI |
| RPA1 | Replication protein A 70 kDa DNA-binding subunit (RP-A p70) (Replication factor A protein 1) (RF-A protein 1) (Single-stranded DNA-binding protein) [Cleaved into: Replication protein A 70 kDa DNA-binding subunit, N-terminally processed] | 5 | UniProt   NCBI |
| TDP1 | Tyrosyl-DNA phosphodiesterase 1 (Tyr-DNA phosphodiesterase 1) (EC 3.1.4.-) | 5 | UniProt   NCBI |
| PARP1 | Poly [ADP-ribose] polymerase 1 (PARP-1) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 1) (ARTD1) (DNA ADP-ribosyltransferase PARP1) (EC 2.4.2.-) (NAD(+) ADP-ribosyltransferase 1) (ADPRT 1) (Poly[ADP-ribose] synthase 1) (Protein poly-ADP-ribosyltransferase PARP1) (EC 2.4.2.-) [Cleaved into: Poly [ADP-ribose] polymerase 1, processed C-terminus (Poly [ADP-ribose] polymerase 1, 89-kDa form); Poly [ADP-ribose] polymerase 1, processed N-terminus (NT-PARP-1) (Poly [ADP-ribose] polymerase 1, 24-kDa form) (Poly [ADP-ribose] polymerase 1, 28-kDa form)] | 5 | UniProt   NCBI |
| CHD1L | Chromodomain-helicase-DNA-binding protein 1-like (EC 3.6.4.-) (Amplified in liver cancer protein 1) | 5 | UniProt   NCBI |
| XRCC5 | X-ray repair cross-complementing protein 5 (EC 3.6.4.-) (86 kDa subunit of Ku antigen) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit) (CTC box-binding factor 85 kDa subunit) (CTC85) (CTCBF) (DNA repair protein XRCC5) (Ku80) (Ku86) (Lupus Ku autoantigen protein p86) (Nuclear factor IV) (Thyroid-lupus autoantigen) (TLAA) (X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)) | 5 | UniProt   NCBI |
| PARP2 | Poly [ADP-ribose] polymerase 2 (PARP-2) (hPARP-2) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 2) (ARTD2) (DNA ADP-ribosyltransferase PARP2) (EC 2.4.2.-) (NAD(+) ADP-ribosyltransferase 2) (ADPRT-2) (Poly[ADP-ribose] synthase 2) (pADPRT-2) (Protein poly-ADP-ribosyltransferase PARP2) (EC 2.4.2.-) | 5 | UniProt   NCBI |
| MACROD1 | ADP-ribose glycohydrolase MACROD1 (MACRO domain-containing protein 1) (O-acetyl-ADP-ribose deacetylase MACROD1) (EC 3.1.1.106) (Protein LRP16) ([Protein ADP-ribosylaspartate] hydrolase MACROD1) (EC 3.2.2.-) ([Protein ADP-ribosylglutamate] hydrolase MACROD1) (EC 3.2.2.-) | 5 | UniProt   NCBI |
| XRCC6 | X-ray repair cross-complementing protein 6 (EC 3.6.4.-) (EC 4.2.99.-) (5'-deoxyribose-5-phosphate lyase Ku70) (5'-dRP lyase Ku70) (70 kDa subunit of Ku antigen) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit) (CTC box-binding factor 75 kDa subunit) (CTC75) (CTCBF) (DNA repair protein XRCC6) (Lupus Ku autoantigen protein p70) (Ku70) (Thyroid-lupus autoantigen) (TLAA) (X-ray repair complementing defective repair in Chinese hamster cells 6) | 5 | UniProt   NCBI |
| RPAIN | RPA-interacting protein (hRIP) | 5 | UniProt   NCBI |
| POLB | DNA polymerase beta (EC 2.7.7.7) (5'-deoxyribose-phosphate lyase) (5'-dRP lyase) (EC 4.2.99.-) (AP lyase) (EC 4.2.99.18) | 5 | UniProt   NCBI |
| XRCC1 | DNA repair protein XRCC1 (X-ray repair cross-complementing protein 1) | 5 | UniProt   NCBI |
| XPA | DNA repair protein complementing XP-A cells (Xeroderma pigmentosum group A-complementing protein) | 5 | UniProt   NCBI |
| PRIMPOL | DNA-directed primase/polymerase protein (hPrimpol1) (EC 2.7.7.-) (Coiled-coil domain-containing protein 111) | 5 | UniProt   NCBI |
| RSF1 | Remodeling and spacing factor 1 (Rsf-1) (HBV pX-associated protein 8) (Hepatitis B virus X-associated protein) (p325 subunit of RSF chromatin-remodeling complex) | 5 | UniProt   NCBI |
| LIG3 | DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3) | 5 | UniProt   NCBI |
Enrichments
| Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
|---|---|---|---|---|
|   GO:0006974 | 5.89920155688e-13 | 0.708333333333 | PARP1 APLF XPA RPA4 HMCES TDP1 HLTF XPC LIG3 PRIMPOL RPA1 CHD1L MACROD1 POLB PNKP RPA3 PARP2 | DNA damage response |
|   GO:0006259 | 1.67806135907e-12 | 0.708333333333 | POLB SSBP1 XPA APLF PARP1 RPA4 HMCES RPA3 XPC LIG3 PRIMPOL RPA1 CHD1L PNKP HLTF TDP1 PARP2 | DNA metabolic process |
|   GO:0006281 | 2.53844969962e-12 | 0.625 | PARP1 APLF XPA RPA4 TDP1 HLTF XPC LIG3 PRIMPOL RPA1 CHD1L POLB PNKP RPA3 PARP2 | DNA repair |
|   WP:WP4946 | 1.08665195728e-11 | 0.375 | PARP1 XPA PNKP XPC LIG3 RPA1 POLB RPA3 PARP2 | DNA repair pathways full network |
|   REAC:R-HSA-73933 | 2.39987197097e-11 | 0.291666666667 | PARP1 PNKP LIG3 RPA1 POLB RPA3 PARP2 | Resolution of Abasic Sites (AP sites) |
|   REAC:R-HSA-5696395 | 9.55961321515e-11 | 0.291666666667 | PARP1 XPA CHD1L XPC PARP2 RPA3 RPA1 | Formation of Incision Complex in GG-NER |
|   REAC:R-HSA-5696399 | 1.56662858408e-10 | 0.333333333333 | PARP1 XPA CHD1L LIG3 XPC PARP2 RPA3 RPA1 | Global Genome Nucleotide Excision Repair (GG-NER) |
|   REAC:R-HSA-73894 | 1.66288378377e-10 | 0.458333333333 | PARP1 XPA CHD1L TDP1 PNKP XPC LIG3 RPA1 POLB RPA3 PARP2 | DNA Repair |
|   REAC:R-HSA-5696398 | 1.36441289313e-09 | 0.333333333333 | PARP1 XPA CHD1L LIG3 XPC PARP2 RPA3 RPA1 | Nucleotide Excision Repair |
|   WP:WP5114 | 2.39521413648e-09 | 0.291666666667 | XPA PARP1 CHD1L LIG3 XPC RPA1 RPA3 | Nucleotide excision repair in xeroderma pigmentosum |
|   KEGG:03410 | 3.55844351849e-09 | 0.25 | PARP1 TDP1 PNKP PARP2 LIG3 POLB | Base excision repair |
|   REAC:R-HSA-73884 | 7.48229636503e-09 | 0.291666666667 | PARP1 PNKP LIG3 RPA1 POLB RPA3 PARP2 | Base Excision Repair |
|   GO:0033554 | 1.03173801321e-08 | 0.708333333333 | PARP1 APLF XPA RPA4 HMCES TDP1 HLTF XPC LIG3 PRIMPOL RPA1 CHD1L MACROD1 POLB PNKP RPA3 PARP2 | cellular response to stress |
|   GO:0006284 | 1.10549516161e-08 | 0.291666666667 | PARP1 XPA PNKP LIG3 RPA1 RPA3 POLB | base-excision repair |
|   REAC:R-HSA-5696400 | 1.29140650853e-08 | 0.25 | PARP1 XPA CHD1L PARP2 RPA3 RPA1 | Dual Incision in GG-NER |
|   CORUM:362 | 1.17907250387e-07 | 0.125 | LIG3 PNKP POLB | DNA ligase III-XRCC1-PNK-DNA-pol III multiprotein complex |
|   CORUM:5243 | 1.17907250387e-07 | 0.125 | LIG3 PNKP TDP1 | XRCC1-LIG3-PNK-TDP1 complex |
|   GO:0003684 | 1.1850063099e-07 | 0.291666666667 | PARP1 XPA PNKP XPC RPA1 RPA3 PARP2 | damaged DNA binding |
|   REAC:R-HSA-110373 | 1.19147992445e-07 | 0.208333333333 | PARP1 PARP2 POLB RPA3 RPA1 | Resolution of AP sites via the multiple-nucleotide patch replacement pathway |
|   WP:WP4752 | 1.36105578971e-07 | 0.208333333333 | PARP1 LIG3 POLB PNKP PARP2 | Base excision repair |
|   GO:0090734 | 1.42779994713e-07 | 0.333333333333 | PARP1 APLF RPA4 RPA3 RPA1 CHD1L PNKP PARP2 | site of DNA damage |
|   GO:0006302 | 3.06259713146e-07 | 0.416666666667 | PARP1 APLF RPA4 TDP1 RPA3 LIG3 RPA1 POLB PNKP PARP2 | double-strand break repair |
|   GO:0005657 | 4.02413417966e-07 | 0.291666666667 | XPA PARP1 RPA4 HMCES RPA1 PRIMPOL RPA3 | replication fork |
|   GO:0006260 | 1.4735469383e-06 | 0.375 | SSBP1 PARP1 RPA4 PNKP LIG3 RPA1 PRIMPOL RPA3 POLB | DNA replication |
|   GO:0006261 | 1.9836512806e-06 | 0.333333333333 | SSBP1 PARP1 RPA4 LIG3 RPA1 PRIMPOL PNKP POLB | DNA-templated DNA replication |
|   KEGG:03420 | 2.01911034344e-06 | 0.208333333333 | XPC RPA1 XPA RPA3 RPA4 | Nucleotide excision repair |
|   KEGG:03430 | 2.9571060341e-06 | 0.166666666667 | SSBP1 RPA1 RPA3 RPA4 | Mismatch repair |
|   CORUM:1004 | 9.84033077196e-06 | 0.125 | PARP1 RPA3 RPA1 | RC complex during S-phase of cell cycle |
|   GO:0003697 | 1.02781054597e-05 | 0.291666666667 | SSBP1 RPA4 HMCES TDP1 XPC RPA1 RPA3 | single-stranded DNA binding |
|   CORUM:1005 | 1.40424645202e-05 | 0.125 | PARP1 RPA3 RPA1 | RC complex during G2/M-phase of cell cycle |
|   WP:WP4016 | 1.79316217329e-05 | 0.208333333333 | PARP1 XPA POLB RPA1 TDP1 | DNA IR damage and cellular response via ATR |
|   KEGG:03030 | 1.93929032814e-05 | 0.166666666667 | SSBP1 RPA1 RPA3 RPA4 | DNA replication |
|   GO:0140097 | 2.45456165629e-05 | 0.333333333333 | APLF PRIMPOL TDP1 LIG3 POLB CHD1L RSF1 HLTF | catalytic activity, acting on DNA |
|   KEGG:03440 | 2.99561003798e-05 | 0.166666666667 | SSBP1 RPA1 RPA3 RPA4 | Homologous recombination |
|   GO:0006950 | 3.08554144989e-05 | 0.75 | POLB PARP1 APLF CHD1L XPA CLEC1B HMCES RPA3 XPC LIG3 PRIMPOL RPA1 RPA4 MACROD1 PNKP HLTF TDP1 PARP2 | response to stress |
|   REAC:R-HSA-5649702 | 4.05978090196e-05 | 0.125 | LIG3 PNKP POLB | APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway |
|   REAC:R-HSA-5693532 | 4.97980583232e-05 | 0.25 | PARP1 TDP1 RPA3 PARP2 LIG3 RPA1 | DNA Double-Strand Break Repair |
|   REAC:R-HSA-110362 | 6.48864838784e-05 | 0.125 | PARP1 PARP2 POLB | POLB-Dependent Long Patch Base Excision Repair |
|   CORUM:7352 | 7.83172113594e-05 | 0.0833333333333 | PARP1 LIG3 | PARP1-LIG3 complex |
|   CORUM:5229 | 7.83172113594e-05 | 0.0833333333333 | RPA3 RPA1 | RPA complex |
|   WP:WP4753 | 8.47731049927e-05 | 0.166666666667 | XPC XPA RPA3 RPA1 | Nucleotide excision repair |
|   GO:0035861 | 0.000101043961432 | 0.25 | PARP1 APLF CHD1L RPA3 RPA4 PNKP | site of double-strand break |
|   GO:0006289 | 0.000118463511905 | 0.25 | XPA RPA4 PNKP XPC RPA1 RPA3 | nucleotide-excision repair |
|   HPA:0460672 | 0.000124999810489 | 0.708333333333 | SSBP1 XPA SSRP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 PARP1 CHD1L RSF1 RNF146 PNKP TDP1 POLB | skin 1; melanocytes[>=Medium] |
|   REAC:R-HSA-5685939 | 0.000190565901148 | 0.125 | PARP1 PARP2 LIG3 | HDR through MMEJ (alt-NHEJ) |
|   GO:0005694 | 0.000195046382978 | 0.583333333333 | PARP1 XPA APLF SSRP1 RPA4 HMCES RPA3 XPC PRIMPOL RPA1 CHD1L RSF1 PNKP PARP2 | chromosome |
|   GO:0005662 | 0.00019795084604 | 0.166666666667 | RPA4 XPA RPA3 RPA1 | DNA replication factor A complex |
|   GO:0043596 | 0.000212375784781 | 0.208333333333 | RPA4 XPA RPA3 PARP1 RPA1 | nuclear replication fork |
|   CORUM:7295 | 0.000234715819577 | 0.0833333333333 | XPA RPA1 | ERCC1-RPA1-XPA complex |
|   GO:0032042 | 0.000377078861379 | 0.166666666667 | SSBP1 PRIMPOL LIG3 PARP1 | mitochondrial DNA metabolic process |
|   CORUM:1086 | 0.000468960518513 | 0.0833333333333 | POLB LIG3 | DNA repair complex NEIL1-PNK-Pol(beta)-LigIII(alpha)-XRCC1 |
|   CORUM:1085 | 0.000468960518513 | 0.0833333333333 | POLB LIG3 | DNA repair complex NEIL2-PNK-Pol(beta)-LigIII(alpha)-XRCC1 |
|   REAC:R-HSA-5693538 | 0.000551288581135 | 0.208333333333 | PARP1 LIG3 PARP2 RPA3 RPA1 | Homology Directed Repair |
|   CORUM:2222 | 0.000780816509459 | 0.0833333333333 | RPA3 RPA1 | BLM complex II |
|   CORUM:2738 | 0.000780816509459 | 0.0833333333333 | RPA3 RPA1 | BLM complex II |
|   HPA:0330222 | 0.00144171818133 | 0.708333333333 | SSBP1 XPA SSRP1 RPA4 HMCES RPA3 XPC LIG3 RPA1 PARP1 CHD1L RSF1 RPAIN POLB PNKP TDP1 PARP2 | oral mucosa; squamous epithelial cells[>=Medium] |
|   REAC:R-HSA-5651801 | 0.00151960321974 | 0.125 | POLB RPA3 RPA1 | PCNA-Dependent Long Patch Base Excision Repair |
|   GO:0005654 | 0.00162536746185 | 0.791666666667 | PARP1 XPA APLF SSRP1 RPAIN RPA4 TDP1 HLTF XPC LIG3 RPA1 CHD1L RSF1 RNF146 MACROD1 POLB PNKP RPA3 PARP2 | nucleoplasm |
|   GO:0043504 | 0.00194127795747 | 0.125 | PARP1 LIG3 PRIMPOL | mitochondrial DNA repair |
|   GO:0043601 | 0.00200531430633 | 0.166666666667 | RPA4 XPA RPA3 RPA1 | nuclear replisome |
|   GO:0000002 | 0.00200531430633 | 0.166666666667 | SSBP1 PRIMPOL LIG3 PARP1 | mitochondrial genome maintenance |
|   GO:0031974 | 0.00208716428434 | 0.875 | SSBP1 XPA APLF SSRP1 RPAIN RPA4 TDP1 HLTF XPC LIG3 PRIMPOL RPA1 PARP1 CHD1L RSF1 RNF146 MACROD1 POLB PNKP RPA3 PARP2 | membrane-enclosed lumen |
|   GO:0043233 | 0.00208716428434 | 0.875 | SSBP1 XPA APLF SSRP1 RPAIN RPA4 TDP1 HLTF XPC LIG3 PRIMPOL RPA1 PARP1 CHD1L RSF1 RNF146 MACROD1 POLB PNKP RPA3 PARP2 | organelle lumen |
|   GO:0070013 | 0.00208716428434 | 0.875 | SSBP1 XPA APLF SSRP1 RPAIN RPA4 TDP1 HLTF XPC LIG3 PRIMPOL RPA1 PARP1 CHD1L RSF1 RNF146 MACROD1 POLB PNKP RPA3 PARP2 | intracellular organelle lumen |
|   REAC:R-HSA-6781827 | 0.00209147933066 | 0.166666666667 | XPA LIG3 RPA3 RPA1 | Transcription-Coupled Nucleotide Excision Repair (TC-NER) |
|   REAC:R-HSA-5696397 | 0.00261657723191 | 0.125 | LIG3 RPA3 RPA1 | Gap-filling DNA repair synthesis and ligation in GG-NER |
|   CORUM:248 | 0.00279967512746 | 0.0833333333333 | RPA3 RPA1 | BRAFT complex |
|   GO:0030894 | 0.00290660524743 | 0.166666666667 | RPA4 XPA RPA3 RPA1 | replisome |
|   HPA:0620222 | 0.00335045720635 | 0.666666666667 | SSBP1 XPA PARP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 CHD1L RSF1 RNF146 PNKP TDP1 PARP2 | vagina; squamous epithelial cells[>=Medium] |
|   GO:0005634 | 0.00351254171072 | 0.916666666667 | RPA4 POLB RSF1 PNKP SSBP1 APLF LIG3 SSRP1 PRIMPOL RNF146 PARP1 XPA CHD1L TDP1 RPA1 RPA3 HMGN4 HLTF RPAIN XPC PARP2 MACROD1 | nucleus |
|   GO:0160002 | 0.00387837112504 | 0.125 | CHD1L APLF PARP2 | ADP-D-ribose modification-dependent protein binding |
|   GO:0072572 | 0.00387837112504 | 0.125 | RNF146 APLF PARP2 | poly-ADP-D-ribose binding |
|   KEGG:03460 | 0.00415966213321 | 0.125 | RPA4 RPA3 RPA1 | Fanconi anemia pathway |
|   CORUM:244 | 0.004268704563 | 0.0833333333333 | RPA3 RPA1 | BRAFT complex |
|   REAC:R-HSA-110381 | 0.00463344224878 | 0.0833333333333 | POLB LIG3 | Resolution of AP sites via the single-nucleotide replacement pathway |
|   GO:0031981 | 0.00500899293269 | 0.791666666667 | PARP1 XPA APLF SSRP1 RPAIN RPA4 TDP1 HLTF XPC LIG3 RPA1 CHD1L RSF1 RNF146 MACROD1 POLB PNKP RPA3 PARP2 | nuclear lumen |
|   CORUM:7388 | 0.00511730766433 | 0.0833333333333 | SSRP1 RSF1 | CENP-A nucleosomal complex |
|   WP:WP466 | 0.00549087301274 | 0.125 | RPA4 RPA3 RPA1 | DNA replication |
|   GO:0003677 | 0.00566024523419 | 0.541666666667 | SSBP1 XPA SSRP1 RPA4 HMCES TDP1 HLTF XPC RPA1 PARP1 PNKP RPA3 PARP2 | DNA binding |
|   REAC:R-HSA-68962 | 0.00615367849057 | 0.125 | RPA4 RPA3 RPA1 | Activation of the pre-replicative complex |
|   HPA:0301371 | 0.00717698350145 | 0.416666666667 | SSBP1 XPA PARP1 CHD1L LIG3 XPC RPA1 RSF1 PNKP PARP2 | lung; alveolar cells type II[>=Low] |
|   HPA:0301373 | 0.00768922996811 | 0.291666666667 | XPA PARP1 LIG3 XPC RPA1 RSF1 PNKP | lung; alveolar cells type II[High] |
|   REAC:R-HSA-5696394 | 0.00946360239723 | 0.125 | XPC PARP2 PARP1 | DNA Damage Recognition in GG-NER |
|   HPA:0610833 | 0.0108986421156 | 0.458333333333 | XPA RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 CHD1L PNKP POLB | urinary bladder; urothelial cells[High] |
|   HPA:0190222 | 0.012207692802 | 0.708333333333 | SSBP1 XPA PARP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 CHD1L RSF1 RNF146 POLB PNKP TDP1 PARP2 | esophagus; squamous epithelial cells[>=Medium] |
|   GO:0006139 | 0.0122784364365 | 0.791666666667 | POLB SSBP1 XPA APLF PARP1 RPA4 HMCES RPA3 XPC LIG3 PRIMPOL RPA1 CHD1L RSF1 MACROD1 PNKP HLTF TDP1 PARP2 | nucleobase-containing compound metabolic process |
|   HPA:0301363 | 0.0151195530664 | 0.25 | XPA PARP1 XPC RPA1 RSF1 PNKP | lung; alveolar cells type I[High] |
|   HPA:0340461 | 0.0160888782816 | 0.625 | PARP1 XPA SSRP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 CHD1L RSF1 RNF146 PNKP POLB | ovary; ovarian stroma cells[>=Low] |
|   HPA:0630052 | 0.0165342702483 | 0.625 | SSBP1 XPA PARP1 RPAIN RPA4 TDP1 RPA3 XPC LIG3 RPA1 CHD1L RSF1 RNF146 PNKP POLB | cervix; glandular cells[>=Medium] |
|   HPA:0530000 | 0.0173750435225 | 0.75 | SSBP1 XPA CHD1L SSRP1 RPAIN CLEC1B HMCES RPA3 XPC LIG3 RPA1 PARP1 RPA4 RSF1 RNF146 PNKP TDP1 POLB | spleen |
|   GO:0090304 | 0.0192240576541 | 0.75 | POLB SSBP1 XPA APLF PARP1 RPA4 HMCES RPA3 XPC LIG3 PRIMPOL RPA1 CHD1L RSF1 PNKP HLTF TDP1 PARP2 | nucleic acid metabolic process |
|   GO:0046483 | 0.0202686116498 | 0.791666666667 | POLB SSBP1 XPA APLF PARP1 RPA4 HMCES RPA3 XPC LIG3 PRIMPOL RPA1 CHD1L RSF1 MACROD1 PNKP HLTF TDP1 PARP2 | heterocycle metabolic process |
|   HPA:0530711 | 0.0208908258389 | 0.708333333333 | PARP1 XPA CHD1L SSRP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 CLEC1B RSF1 RNF146 PNKP TDP1 POLB | spleen; cells in red pulp[>=Low] |
|   GO:0006725 | 0.0213783944493 | 0.791666666667 | POLB SSBP1 XPA APLF PARP1 RPA4 HMCES RPA3 XPC LIG3 PRIMPOL RPA1 CHD1L RSF1 MACROD1 PNKP HLTF TDP1 PARP2 | cellular aromatic compound metabolic process |
|   HPA:0380512 | 0.0217493234091 | 0.583333333333 | PARP1 XPA RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 CHD1L RSF1 RNF146 PNKP TDP1 | placenta; decidual cells[>=Medium] |
|   HPA:0460671 | 0.0219667205243 | 0.708333333333 | SSBP1 XPA SSRP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 PARP1 CHD1L RSF1 RNF146 PNKP TDP1 POLB | skin 1; melanocytes[>=Low] |
|   GO:0000012 | 0.0231700664584 | 0.125 | PARP1 APLF TDP1 | single strand break repair |
|   HPA:0301361 | 0.0233228989055 | 0.333333333333 | XPA PARP1 CHD1L LIG3 XPC RPA1 RSF1 PNKP | lung; alveolar cells type I[>=Low] |
|   HPA:0610832 | 0.0249318997689 | 0.75 | SSBP1 XPA SSRP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 PARP1 CHD1L RSF1 RNF146 POLB PNKP TDP1 PARP2 | urinary bladder; urothelial cells[>=Medium] |
|   HPA:0620000 | 0.0260622677864 | 0.75 | SSBP1 XPA SSRP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 PARP1 CHD1L RSF1 RNF146 POLB PNKP TDP1 PARP2 | vagina |
|   HPA:0620221 | 0.0260622677864 | 0.75 | SSBP1 XPA SSRP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 PARP1 CHD1L RSF1 RNF146 POLB PNKP TDP1 PARP2 | vagina; squamous epithelial cells[>=Low] |
|   HPA:0310441 | 0.0262067987726 | 0.75 | SSBP1 XPA CHD1L SSRP1 RPAIN CLEC1B HMCES RPA3 XPC LIG3 RPA1 PARP1 RPA4 RSF1 RNF146 POLB PNKP PARP2 | lymph node; non-germinal center cells[>=Low] |
|   HPA:0600441 | 0.029820633559 | 0.75 | SSBP1 XPA CHD1L SSRP1 RPAIN CLEC1B HMCES RPA3 XPC LIG3 RPA1 PARP1 RPA4 RSF1 RNF146 POLB PNKP PARP2 | tonsil; non-germinal center cells[>=Low] |
|   HPA:0380511 | 0.0318238426814 | 0.666666666667 | PARP1 XPA RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 CHD1L RSF1 RNF146 POLB PNKP TDP1 PARP2 | placenta; decidual cells[>=Low] |
|   GO:0006264 | 0.0318245054916 | 0.125 | SSBP1 LIG3 PRIMPOL | mitochondrial DNA replication |
|   GO:0140640 | 0.0367253818481 | 0.333333333333 | APLF PRIMPOL TDP1 LIG3 POLB CHD1L RSF1 HLTF | catalytic activity, acting on a nucleic acid |
|   GO:1901360 | 0.0396358438741 | 0.791666666667 | POLB SSBP1 XPA APLF PARP1 RPA4 HMCES RPA3 XPC LIG3 PRIMPOL RPA1 CHD1L RSF1 MACROD1 PNKP HLTF TDP1 PARP2 | organic cyclic compound metabolic process |
|   HPA:0050011 | 0.0401170697614 | 0.5 | PARP1 XPA RPAIN RPA4 PNKP XPC LIG3 RPA1 CHD1L RSF1 RNF146 RPA3 | breast; adipocytes[>=Low] |
|   CORUM:929 | 0.0425481611519 | 0.0833333333333 | SSRP1 RSF1 | CEN complex |
|   REAC:R-HSA-6782210 | 0.0433642014313 | 0.125 | LIG3 RPA3 RPA1 | Gap-filling DNA repair synthesis and ligation in TC-NER |
|   HPA:0301362 | 0.0446515233333 | 0.291666666667 | XPA PARP1 LIG3 XPC RPA1 RSF1 PNKP | lung; alveolar cells type I[>=Medium] |
|   REAC:R-HSA-6782135 | 0.0454478801614 | 0.125 | XPA RPA3 RPA1 | Dual incision in TC-NER |
|   WP:WP2446 | 0.0466830573385 | 0.125 | RPA1 HLTF RPA3 | Retinoblastoma gene in cancer |
|   HPA:0380513 | 0.0468244833363 | 0.333333333333 | PARP1 XPA RPAIN PNKP LIG3 RPA1 CHD1L RPA3 | placenta; decidual cells[High] |
|   HPA:0330221 | 0.0475000581438 | 0.75 | SSBP1 XPA SSRP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 PARP1 CHD1L RSF1 RNF146 POLB PNKP TDP1 PARP2 | oral mucosa; squamous epithelial cells[>=Low] |
|   HPA:0330000 | 0.0475000581438 | 0.75 | SSBP1 XPA SSRP1 RPAIN RPA4 HMCES RPA3 XPC LIG3 RPA1 PARP1 CHD1L RSF1 RNF146 POLB PNKP TDP1 PARP2 | oral mucosa |
|   HPA:0600222 | 0.0477231007219 | 0.666666666667 | SSBP1 XPA PARP1 RPAIN RPA4 HMCES RPA3 SSRP1 LIG3 RPA1 CHD1L RSF1 RNF146 POLB PNKP PARP2 | tonsil; squamous epithelial cells[>=Medium] |
|   CORUM:923 | 0.0497620750785 | 0.0416666666667 | RSF1 | SNF2L-RSF1 complex |
|   CORUM:212 | 0.0497620750785 | 0.0416666666667 | LIG3 | DNA ligase III-XRCC1 complex |
|   CORUM:363 | 0.0497620750785 | 0.0416666666667 | LIG3 | DNA ligase III-XRCC1 complex |
|   CORUM:365 | 0.0497620750785 | 0.0416666666667 | LIG3 | DNA ligase III-XRCC1 complex |
|   WP:WP3645 | 0.0498877769309 | 0.0833333333333 | PARP1 PARP2 | NAD biosynthetic pathways |
Edges
| Protein 1 | Protein 2 | Score | ProteomeHD | Interface Overlap |
|---|---|---|---|---|
|  RPA3 |  RPA2 | 1.0 | 0.958           |
structurally_consistent (dimer)        
|
|  RPA1 |  RPA2 | 1.0 | 0.802           |          |
|  RPA3 |  RPA1 | 1.0 | 0.658           |
mutually_exclusive (Q13156)        
|
|  XRCC6 |  XRCC5 | 1.0 | 0.96           |
structurally_consistent (dimer)        
|
|  LIG3 |  XRCC1 | 1.0 | 0.55           |          |
|  POLB |  XRCC1 | 0.999 | 0.084           |
mutually_exclusive (P35244)        
|
|  POLB |  PARP2 | 0.999 | 0.04           |          |
|  LIG3 |  POLB | 0.999 | 0.1           |          |
|  RPA1 |  RPAIN | 0.999 | 0.196           |          |
|  RPA2 |  RPAIN | 0.999 | 0.208           |          |
|  RNF146 |  PARP2 | 0.999 | 0.088           |
structurally_consistent (dimer)        
|
|  RPA1 |  RPA4 | 0.998 |            |
structurally_consistent (dimer)        
|
|  XRCC5 |  APLF | 0.998 |            |
structurally_consistent (dimer)        
|
|  LIG3 |  PNKP | 0.998 | 0.18           |          |
|  XRCC6 |  APLF | 0.998 |            |          |
|  XRCC6 |  RPA2 | 0.997 | 0.456           |          |
|  APLF |  XPC | 0.997 |            |          |
|  APLF |  PARP1 | 0.997 |            |          |
|  APLF |  PARP2 | 0.997 |            |          |
|  RPAIN |  RPA4 | 0.997 |            |          |
|  XPA |  RPA3 | 0.996 | 0.106           |          |
|  APLF |  LIG3 | 0.996 |            |          |
|  RSF1 |  HMGN4 | 0.996 | 0.054           |          |
|  LIG3 |  TDP1 | 0.996 | 0.0660385964912           |          |
|  XPC |  RPA2 | 0.995 | 0.14           |          |
|  XRCC6 |  PARP1 | 0.995 | 0.55           |
structurally_consistent (dimer)        
|
|  APLF |  RPA2 | 0.995 |            |          |
|  APLF |  RPA1 | 0.995 |            |          |
|  RPA3 |  RPA4 | 0.995 |            |
structurally_consistent (dimer)        
|
|  XPC |  RPA1 | 0.994 | 0.218           |          |
|  PARP2 |  H2AC4 | 0.994 |            |          |
|  APLF |  HLTF | 0.994 |            |          |
|  PNKP |  POLB | 0.994 | 0.108           |          |
|  SSRP1 |  PARP1 | 0.994 | 0.562           |          |
|  XPC |  PARP2 | 0.993 | 0.032           |          |
|  PNKP |  XRCC1 | 0.993 | 0.13           |          |
|  XPC |  RPA3 | 0.993 | 0.156           |          |
|  SSBP1 |  RPA2 | 0.993 | 0.24           |          |
|  APLF |  POLB | 0.993 |            |          |
|  HLTF |  CHD1L | 0.993 | 0.09           |          |
|  XPC |  PARP1 | 0.992 | 0.363073394495           |          |
|  SSBP1 |  RPA4 | 0.992 |            |          |
|  LIG3 |  PARP2 | 0.991 | 0.076           |          |
|  MACROD1 |  PARP1 | 0.991 | 0.166           |
structurally_consistent (dimer)        
|
|  APLF |  XRCC1 | 0.99 |            |          |
|  XPC |  RPA4 | 0.99 |            |          |
|  XRCC5 |  RPA2 | 0.99 | 0.424           |          |
|  RPA3 |  RPAIN | 0.989 | 0.288           |          |
|  XPA |  RPA2 | 0.989 | 0.196           |          |
|  LIG3 |  RPA2 | 0.989 | 0.106           |          |
|  SSRP1 |  APLF | 0.989 |            |          |
|  RNF146 |  CHD1L | 0.988 | 0.06           |          |
|  HMCES |  RPA1 | 0.988 | 0.08           |          |
|  XPC |  CHD1L | 0.988 | 0.024           |          |
|  POLB |  TDP1 | 0.986 | 0.13           |          |
|  LIG3 |  RPA4 | 0.986 |            |
structurally_consistent (dimer)        
|
|  RPA2 |  PARP1 | 0.985 | 0.424           |          |
|  XPC |  RNF146 | 0.984 | 0.182           |
structurally_consistent (dimer)        
|
|  HLTF |  XPC | 0.984 | 0.032           |          |
|  RPA2 |  PARP2 | 0.983 | 0.048           |          |
|  APLF |  RPA3 | 0.983 |            |          |
|  RPAIN |  PARP1 | 0.983 | 0.226           |          |
|  LIG3 |  PARP1 | 0.982 | 0.53           |          |
|  LIG3 |  XPC | 0.981 | 0.164           |          |
|  MACROD1 |  RPA2 | 0.978 | 0.026           |          |
|  HLTF |  RPA2 | 0.977 | 0.07           |          |
|  HMGN4 |  XPC | 0.977 | 0.032           |          |
|  XRCC5 |  H2AC4 | 0.977 |            |          |
|  XPC |  POLB | 0.976 | 0.19           |          |
|  POLB |  PARP1 | 0.974 | 0.313555555556           |          |
|  RPA1 |  SSBP1 | 0.974 | 0.244           |          |
|  LIG3 |  HLTF | 0.973 | 0.1           |          |
|  HLTF |  RPA1 | 0.972 | 0.204166666667           |          |
|  RNF146 |  PARP1 | 0.972 | 0.216           |          |
|  HMGN4 |  PARP2 | 0.972 | 0.046           |          |
|  RPA4 |  PARP1 | 0.97 |            |          |
|  XRCC6 |  PARP2 | 0.97 | 0.206           |          |
|  SSRP1 |  POLB | 0.97 | 0.154           |          |
|  HMCES |  RPA4 | 0.969 |            |          |
|  PARP2 |  CHD1L | 0.966 | 0.054           |          |
|  XRCC6 |  CHD1L | 0.966 | 0.198           |          |
|  XRCC5 |  CHD1L | 0.965 | 0.264           |          |
|  HMCES |  RPA2 | 0.965 | 0.166           |          |
|  MACROD1 |  XPC | 0.964 | 0.022           |          |
|  HLTF |  PARP1 | 0.963 | 0.482857142857           |          |
|  RPA1 |  CHD1L | 0.962 | 0.204           |          |
|  LIG3 |  RPA3 | 0.962 | 0.12           |          |
|  SSBP1 |  CLEC1B | 0.96 |            |          |
|  XRCC6 |  LIG3 | 0.96 | 0.338           |          |
|  CHD1L |  PARP1 | 0.958 | 0.470310125952           |          |
|  HLTF |  RPA3 | 0.957 | 0.048           |          |
|  RPA3 |  HMCES | 0.957 | 0.072           |          |
|  XRCC5 |  LIG3 | 0.955 | 0.306           |          |
|  SSRP1 |  H2AC4 | 0.952 |            |          |
|  PRIMPOL |  RPA2 | 0.951 |            |          |
|  LIG3 |  RPA1 | 0.951 | 0.202           |          |
|  MACROD1 |  PARP2 | 0.95 | 0.034           |
structurally_consistent (dimer)        
|
|  XPA |  SSBP1 | 0.948 | 0.062           |          |
|  SSRP1 |  MACROD1 | 0.947 | 0.04           |          |
|  XRCC1 |  CHD1L | 0.943 | 0.102           |          |
|  XRCC1 |  RPA2 | 0.943 | 0.232           |          |
|  SSRP1 |  CHD1L | 0.94 | 0.144           |          |
|  XRCC6 |  RPA4 | 0.937 |            |          |
|  XPC |  H2AC4 | 0.936 |            |          |
|  XRCC6 |  XPC | 0.932 | 0.314           |          |
|  RPA2 |  RPA4 | 0.931 |            |
mutually_exclusive (P35244)        
|
|  HMGN4 |  SSRP1 | 0.931 | 0.094           |          |
|  PRIMPOL |  SSBP1 | 0.926 |            |          |
|  XRCC6 |  H2AC4 | 0.924 |            |          |
|  RPA3 |  RNF146 | 0.92 | 0.148           |          |
|  LIG3 |  CHD1L | 0.92 | 0.094           |          |
|  XRCC6 |  SSRP1 | 0.92 | 0.588           |          |
|  XRCC1 |  TDP1 | 0.918 | 0.172           |          |
|  SSRP1 |  RNF146 | 0.915 | 0.106           |          |
|  HMGN4 |  XRCC6 | 0.914 | 0.274           |          |
|  SSRP1 |  XPC | 0.914 | 0.184           |
structurally_consistent (dimer)        
|
|  RNF146 |  RPA2 | 0.91 | 0.112           |          |
|  HMGN4 |  XRCC5 | 0.909 | 0.296571428571           |          |
|  XRCC1 |  PARP2 | 0.908 | 0.07           |          |
|  XRCC5 |  PARP1 | 0.905 | 0.672           |
mutually_exclusive (P12956)        
|
|  HMGN4 |  H2AC4 | 0.904 |            |          |
|  APLF |  TDP1 | 0.904 |            |          |
|  SSRP1 |  RPA2 | 0.904 | 0.323           |          |
|  HLTF |  RNF146 | 0.903 | 0.094           |          |
|  RPA2 |  CHD1L | 0.9 | 0.082           |          |
|  SSRP1 |  LIG3 | 0.896 | 0.108           |          |
|  HLTF |  H2AC4 | 0.896 |            |          |
|  H2AC4 |  PARP1 | 0.885 |            |          |
|  RPA3 |  PARP2 | 0.883 | 0.078           |          |
|  XPA |  RPA1 | 0.88 | 0.122           |          |
|  HLTF |  POLB | 0.878 | 0.036           |          |
|  RPA3 |  SSBP1 | 0.875 | 0.348           |          |
|  PNKP |  TDP1 | 0.862 | 0.12           |          |
|  XRCC6 |  RNF146 | 0.862 | 0.136           |          |
|  XRCC5 |  RNF146 | 0.861 | 0.136           |          |
|  APLF |  H2AC4 | 0.86 |            |          |
|  XPC |  SSBP1 | 0.859 | 0.136           |          |
|  PRIMPOL |  RPA1 | 0.857 |            |          |
|  SSRP1 |  RPA1 | 0.855 | 0.398           |          |
|  XRCC5 |  XPC | 0.853 | 0.292           |          |
|  XRCC5 |  RPA4 | 0.852 |            |          |
|  RSF1 |  H2AC4 | 0.848 |            |          |
|  RSF1 |  LIG3 | 0.841 | 0.176           |          |
|  MACROD1 |  RPA1 | 0.841 | 0.052           |          |
|  RPA3 |  CHD1L | 0.836 | 0.102           |          |
|  RPA1 |  RNF146 | 0.834 | 0.112           |          |
|  XRCC5 |  SSRP1 | 0.831 | 0.408           |          |
|  POLB |  RPA1 | 0.825 | 0.112           |          |
|  XRCC5 |  HLTF | 0.823 | 0.114           |          |
|  POLB |  RPA2 | 0.823 | 0.1           |          |
|  APLF |  CHD1L | 0.818 |            |          |
|  SSRP1 |  HMCES | 0.814 | 0.146           |          |
|  HMCES |  PARP2 | 0.814 | 0.034           |          |
|  XRCC6 |  RPA3 | 0.808 | 0.612           |          |
|  XRCC6 |  XRCC1 | 0.807 | 0.336           |          |
|  SSRP1 |  HLTF | 0.795 | 0.186           |          |
|  XRCC6 |  POLB | 0.794 | 0.302           |          |
|  HLTF |  XRCC1 | 0.791 | 0.07           |          |
|  XPC |  TDP1 | 0.787 | 0.05           |          |
|  PARP2 |  RPA4 | 0.786 |            |          |
|  TDP1 |  PARP2 | 0.785 | 0.092           |          |
|  XRCC5 |  MACROD1 | 0.779 | 0.186           |          |
|  SSRP1 |  PARP2 | 0.777 | 0.266           |          |
|  POLB |  RPA3 | 0.737 | 0.106           |
structurally_consistent (dimer)        
|
|  MACROD1 |  RPA3 | 0.734 | 0.052           |
mutually_exclusive (P41208)        
|
|  HMGN4 |  PARP1 | 0.729 | 0.09           |          |
|  XPC |  HMCES | 0.716 | 0.01           |          |
|  XRCC5 |  POLB | 0.71 | 0.306           |          |
|  RSF1 |  XPC | 0.708 | 0.052           |          |
|  RSF1 |  PARP2 | 0.691 | 0.038           |          |
|  SSRP1 |  RPA4 | 0.681 |            |          |
|  PNKP |  PARP2 | 0.661 | 0.046           |          |
|  HLTF |  PARP2 | 0.654 | 0.086           |          |
|  RSF1 |  SSRP1 | 0.652 | 0.254           |          |
|  RPA1 |  H2AC4 | 0.644 |            |          |
|  HMCES |  RPAIN | 0.643 | 0.034           |          |
|  XRCC6 |  MACROD1 | 0.63 | 0.2           |          |
|  PNKP |  RPA2 | 0.624 | 0.1           |          |
|  XRCC6 |  RPA1 | 0.614 | 0.654           |          |
|  RPA1 |  PARP1 | 0.605 | 0.63           |          |
|  XRCC6 |  HLTF | 0.561 | 0.106           |          |
|  RPA1 |  PARP2 | 0.555 | 0.11           |          |
|  XRCC5 |  PARP2 | 0.538 | 0.198           |          |
|  XRCC5 |  PNKP | 0.532 | 0.336193548387           |          |
|  SSRP1 |  RPA3 | 0.516 | 0.368           |          |
|  XRCC5 |  RPA1 | 0.516 | 0.632           |          |
|  XPC |  XRCC1 | 0.515 | 0.126           |          |
|  LIG3 |  HMCES | 0.515 | 0.052           |          |
|  LIG3 |  RPAIN | 0.512 | 0.1           |          |
|  PRIMPOL |  RPA3 | 0.505 |            |          |
|  XPC |  RPAIN | 0.469 | 0.062           |          |
|  TDP1 |  RPA1 | 0.465 | 0.11           |          |
|  RPA3 |  H2AC4 | 0.462 |            |          |
|  TDP1 |  RPA3 | 0.457 | 0.034           |          |
|  XRCC1 |  H2AC4 | 0.436 |            |          |
|  XRCC6 |  HMCES | 0.433 | 0.08           |          |
|  RPA2 |  H2AC4 | 0.43 |            |          |
|  XRCC1 |  RPA1 | 0.429 | 0.22           |          |
|  PARP2 |  PARP1 | 0.423 | 0.307277777778           |
mutually_exclusive (Q9BQ69)        
|
|  XRCC5 |  HMCES | 0.41 | 0.088           |          |
|  RSF1 |  XRCC1 | 0.405 | 0.232           |          |
|  SSRP1 |  XRCC1 | 0.399 | 0.196           |          |
|  RSF1 |  RPA3 | 0.391 | 0.113           |          |
|  RSF1 |  RPA2 | 0.386 | 0.144           |          |
|  TDP1 |  RPA2 | 0.379 | 0.042           |          |
|  XRCC6 |  PNKP | 0.375 | 0.308           |          |
|  XPA |  HMCES | 0.372 | 0.092           |          |
|  HMCES |  PARP1 | 0.355 | 0.144333333333           |          |
|  LIG3 |  RNF146 | 0.345 | 0.064           |          |
|  RSF1 |  XRCC6 | 0.34 | 0.31           |          |
|  XRCC5 |  RPA3 | 0.32 | 0.578           |          |
|  TDP1 |  PARP1 | 0.314 | 0.214           |          |
|  LIG3 |  H2AC4 | 0.305 |            |
structurally_consistent (dimer)        
|
|  LIG3 |  MACROD1 | 0.304 | 0.036           |          |
|  APLF |  PNKP | 0.297 |            |          |
|  PNKP |  PARP1 | 0.292 | 0.338764705882           |          |
|  RNF146 |  H2AC4 | 0.291 |            |          |
|  SSRP1 |  TDP1 | 0.284 | 0.187333333333           |          |
|  HLTF |  RPAIN | 0.283 | 0.078           |          |
|  SSBP1 |  PARP1 | 0.264 | 0.462           |          |
|  XRCC1 |  RPA3 | 0.253 | 0.098           |
structurally_consistent (dimer)        
|
|  RSF1 |  HMCES | 0.251 | 0.024           |          |
|  RPA3 |  PARP1 | 0.242 | 0.42           |          |
|  RSF1 |  XRCC5 | 0.239 | 0.25           |          |
|  XRCC5 |  XRCC1 | 0.234 | 0.286           |          |
|  XRCC1 |  PARP1 | 0.23 | 0.434955555556           |          |
|  PARP2 |  RPAIN | 0.204 | 0.088           |          |
|  SSRP1 |  RPAIN | 0.195 | 0.094           |          |
|  RSF1 |  PARP1 | 0.193 | 0.334           |          |
|  RSF1 |  HLTF | 0.172 | 0.062           |          |
|  SSBP1 |  PARP2 | 0.17 | 0.09           |          |
|  XRCC1 |  RNF146 | 0.164 | 0.14           |          |
|  POLB |  CHD1L | 0.115 | 0.064           |          |
|  XRCC6 |  TDP1 | 0.114 | 0.365333333333           |          |
|  XPC |  PNKP | 0.111 | 0.108           |          |
|  PRIMPOL |  H2AC4 | 0.109 |            |          |
|  RSF1 |  RPA1 | 0.103 | 0.118362934363           |          |
|  HLTF |  TDP1 | 0.095 | 0.06           |          |
|  TDP1 |  CHD1L | 0.094 | 0.17           |          |
|  SSBP1 |  RPAIN | 0.091 | 0.076           |          |
|  TDP1 |  H2AC4 | 0.091 |            |          |
|  HMCES |  SSBP1 | 0.086 | 0.064           |          |
|  POLB |  HMCES | 0.085 | 0.022           |          |
|  APLF |  HMCES | 0.082 |            |          |
|  RSF1 |  APLF | 0.079 |            |          |
|  RSF1 |  CHD1L | 0.079 | 0.054           |          |
|  XRCC5 |  TDP1 | 0.078 | 0.278           |          |
|  XPC |  XPA | 0.076 | 0.094           |          |
|  XRCC5 |  RPAIN | 0.073 | 0.136           |          |
|  HLTF |  HMCES | 0.072 | 0.046           |          |
|  PNKP |  RPA1 | 0.071 | 0.106           |          |
|  XRCC1 |  HMCES | 0.069 | 0.068           |          |
|  PNKP |  HMCES | 0.068 | 0.054           |          |
|  HLTF |  MACROD1 | 0.067 | 0.036           |          |
|  XRCC6 |  RPAIN | 0.067 | 0.232           |          |
|  HMGN4 |  RPA1 | 0.062 | 0.08           |          |
|  HMGN4 |  RPA2 | 0.06 | 0.024           |          |
|  XPA |  PARP1 | 0.059 | 0.212275862069           |          |
|  APLF |  SSBP1 | 0.058 |            |          |
|  HMGN4 |  RPA3 | 0.054 | 0.05           |          |
|  CHD1L |  H2AC4 | 0.053 |            |          |
|  HLTF |  PNKP | 0.053 | 0.042           |          |
|  HMCES |  H2AC4 | 0.051 |            |          |
|  HMCES |  CHD1L | 0.047 | 0.036           |          |
|  LIG3 |  SSBP1 | 0.042 | 0.094           |          |
|  SSRP1 |  PNKP | 0.04 | 0.104           |          |
|  POLB |  H2AC4 | 0.037 |            |          |
|  HMGN4 |  HLTF | 0.033 | 0.068           |          |
|  HLTF |  SSBP1 | 0.031 | 0.05           |          |
|  XRCC5 |  SSBP1 | 0.031 | 0.332           |          |
|  HLTF |  RPA4 | 0.024 |            |          |
|  SSBP1 |  H2AC4 | 0.023 |            |          |
|  HLTF |  XPA | 0.021 | 0.078           |          |
|  RSF1 |  SSBP1 | 0.016 | 0.136           |          |
|  XRCC1 |  SSBP1 | 0.016 | 0.156           |          |
|  SSRP1 |  XPA | 0.016 | 0.096           |          |
|  PNKP |  RPA3 | 0.015 | 0.056           |          |
|  XRCC6 |  XPA | 0.014 | 0.256           |          |
|  RNF146 |  SSBP1 | 0.013 | 0.14           |          |
|  XPA |  H2AC4 | 0.013 |            |          |
|  PNKP |  H2AC4 | 0.009 |            |          |
|  MACROD1 |  H2AC4 | 0.009 |            |          |
|  XRCC6 |  SSBP1 | 0.008 | 0.374           |          |
|  CLEC1B |  PARP1 | 0.006 |            |          |
|  HMGN4 |  SSBP1 | 0.005 | 0.086           |          |
|  XRCC5 |  XPA | 0.004 | 0.192           |
structurally_consistent (dimer)        
|
|  MACROD1 |  SSBP1 | 0.004 | 0.104           |          |
|  PRIMPOL |  XRCC5 | 0.004 |            |          |
|  RPA4 |  H2AC4 | 0.004 |            |
mutually_exclusive (P49916)        
|
|  POLB |  SSBP1 | 0.004 | 0.162           |          |
|  CLEC1B |  H2AC4 | 0.004 |            |          |
|  SSBP1 |  CHD1L | 0.004 | 0.18           |          |
|  RPA1 |  CLEC1B | 0.004 |            |          |
|  PNKP |  SSBP1 | 0.003 | 0.048           |          |
|  XRCC6 |  CLEC1B | 0.002 |            |          |
|  RPAIN |  H2AC4 | 0.002 |            |          |
|  TDP1 |  SSBP1 | 0.001 | 0.046           |          |
|  XRCC5 |  CLEC1B | 0.001 |            |          |
|  SSRP1 |  SSBP1 | 0.001 | 0.214           |          |
Related Complexes