hu.MAP 3.0: Complex View
Human Protein Complex Map
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Complex: huMAP3_13854.1
Complex Portal: CPX-14770
Confidence: Medium  
Proteins| Genename | Protein Name | Uniprot Annotation Score | Links |
|---|---|---|---|
| H2AC4 | Histone H2A type 1-B/E (Histone H2A.2) (Histone H2A/a) (Histone H2A/m) | 5 | UniProt   NCBI |
| SSBP1 | Single-stranded DNA-binding protein, mitochondrial (Mt-SSB) (MtSSB) (PWP1-interacting protein 17) | 5 | UniProt   NCBI |
| XPC | DNA repair protein complementing XP-C cells (Xeroderma pigmentosum group C-complementing protein) (p125) | 5 | UniProt   NCBI |
| HLTF | Helicase-like transcription factor (EC 2.3.2.27) (EC 3.6.4.-) (DNA-binding protein/plasminogen activator inhibitor 1 regulator) (HIP116) (RING finger protein 80) (RING-type E3 ubiquitin transferase HLTF) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3) (Sucrose nonfermenting protein 2-like 3) | 5 | UniProt   NCBI |
| CLEC1B | C-type lectin domain family 1 member B (C-type lectin-like receptor 2) (CLEC-2) | 5 | UniProt   NCBI |
| RPA3 | Replication protein A 14 kDa subunit (RP-A p14) (Replication factor A protein 3) (RF-A protein 3) | 5 | UniProt   NCBI |
| APLF | Aprataxin and PNK-like factor (EC 3.1.-.-) (Apurinic-apyrimidinic endonuclease APLF) (PNK and APTX-like FHA domain-containing protein) (XRCC1-interacting protein 1) | 5 | UniProt   NCBI |
| HMGN4 | High mobility group nucleosome-binding domain-containing protein 4 (Non-histone chromosomal protein HMG-17-like 3) (Non-histone chromosomal protein) | 3 | UniProt   NCBI |
| HMCES | Abasic site processing protein HMCES (EC 4.-.-.-) (Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein) (ES cell-specific 5hmC-binding protein) (Peptidase HMCES) (EC 3.4.-.-) (SRAP domain-containing protein 1) | 5 | UniProt   NCBI |
| PNKP | Bifunctional polynucleotide phosphatase/kinase (DNA 5'-kinase/3'-phosphatase) (Polynucleotide kinase-3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)] | 5 | UniProt   NCBI |
| RPA4 | Replication protein A 30 kDa subunit (RP-A p30) (Replication factor A protein 4) (RF-A protein 4) | 5 | UniProt   NCBI |
| SSRP1 | FACT complex subunit SSRP1 (Chromatin-specific transcription elongation factor 80 kDa subunit) (Facilitates chromatin transcription complex 80 kDa subunit) (FACT 80 kDa subunit) (FACTp80) (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) (Structure-specific recognition protein 1) (hSSRP1) (T160) | 5 | UniProt   NCBI |
| RPA2 | Replication protein A 32 kDa subunit (RP-A p32) (Replication factor A protein 2) (RF-A protein 2) (Replication protein A 34 kDa subunit) (RP-A p34) | 5 | UniProt   NCBI |
| RNF146 | E3 ubiquitin-protein ligase RNF146 (EC 2.3.2.27) (Dactylidin) (Iduna) (RING finger protein 146) (RING-type E3 ubiquitin transferase RNF146) | 5 | UniProt   NCBI |
| RPA1 | Replication protein A 70 kDa DNA-binding subunit (RP-A p70) (Replication factor A protein 1) (RF-A protein 1) (Single-stranded DNA-binding protein) [Cleaved into: Replication protein A 70 kDa DNA-binding subunit, N-terminally processed] | 5 | UniProt   NCBI |
| TDP1 | Tyrosyl-DNA phosphodiesterase 1 (Tyr-DNA phosphodiesterase 1) (EC 3.1.4.-) | 5 | UniProt   NCBI |
| PARP1 | Poly [ADP-ribose] polymerase 1 (PARP-1) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 1) (ARTD1) (DNA ADP-ribosyltransferase PARP1) (EC 2.4.2.-) (NAD(+) ADP-ribosyltransferase 1) (ADPRT 1) (Poly[ADP-ribose] synthase 1) (Protein poly-ADP-ribosyltransferase PARP1) (EC 2.4.2.-) [Cleaved into: Poly [ADP-ribose] polymerase 1, processed C-terminus (Poly [ADP-ribose] polymerase 1, 89-kDa form); Poly [ADP-ribose] polymerase 1, processed N-terminus (NT-PARP-1) (Poly [ADP-ribose] polymerase 1, 24-kDa form) (Poly [ADP-ribose] polymerase 1, 28-kDa form)] | 5 | UniProt   NCBI |
| CHD1L | Chromodomain-helicase-DNA-binding protein 1-like (EC 3.6.4.-) (Amplified in liver cancer protein 1) | 5 | UniProt   NCBI |
| XRCC5 | X-ray repair cross-complementing protein 5 (EC 3.6.4.-) (86 kDa subunit of Ku antigen) (ATP-dependent DNA helicase 2 subunit 2) (ATP-dependent DNA helicase II 80 kDa subunit) (CTC box-binding factor 85 kDa subunit) (CTC85) (CTCBF) (DNA repair protein XRCC5) (Ku80) (Ku86) (Lupus Ku autoantigen protein p86) (Nuclear factor IV) (Thyroid-lupus autoantigen) (TLAA) (X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)) | 5 | UniProt   NCBI |
| PARP2 | Poly [ADP-ribose] polymerase 2 (PARP-2) (hPARP-2) (EC 2.4.2.30) (ADP-ribosyltransferase diphtheria toxin-like 2) (ARTD2) (DNA ADP-ribosyltransferase PARP2) (EC 2.4.2.-) (NAD(+) ADP-ribosyltransferase 2) (ADPRT-2) (Poly[ADP-ribose] synthase 2) (pADPRT-2) (Protein poly-ADP-ribosyltransferase PARP2) (EC 2.4.2.-) | 5 | UniProt   NCBI |
| MACROD1 | ADP-ribose glycohydrolase MACROD1 (MACRO domain-containing protein 1) (O-acetyl-ADP-ribose deacetylase MACROD1) (EC 3.1.1.106) (Protein LRP16) ([Protein ADP-ribosylaspartate] hydrolase MACROD1) (EC 3.2.2.-) ([Protein ADP-ribosylglutamate] hydrolase MACROD1) (EC 3.2.2.-) | 5 | UniProt   NCBI |
| XRCC6 | X-ray repair cross-complementing protein 6 (EC 3.6.4.-) (EC 4.2.99.-) (5'-deoxyribose-5-phosphate lyase Ku70) (5'-dRP lyase Ku70) (70 kDa subunit of Ku antigen) (ATP-dependent DNA helicase 2 subunit 1) (ATP-dependent DNA helicase II 70 kDa subunit) (CTC box-binding factor 75 kDa subunit) (CTC75) (CTCBF) (DNA repair protein XRCC6) (Lupus Ku autoantigen protein p70) (Ku70) (Thyroid-lupus autoantigen) (TLAA) (X-ray repair complementing defective repair in Chinese hamster cells 6) | 5 | UniProt   NCBI |
| RPAIN | RPA-interacting protein (hRIP) | 5 | UniProt   NCBI |
| POLB | DNA polymerase beta (EC 2.7.7.7) (5'-deoxyribose-phosphate lyase) (5'-dRP lyase) (EC 4.2.99.-) (AP lyase) (EC 4.2.99.18) | 5 | UniProt   NCBI |
| XRCC1 | DNA repair protein XRCC1 (X-ray repair cross-complementing protein 1) | 5 | UniProt   NCBI |
| XPA | DNA repair protein complementing XP-A cells (Xeroderma pigmentosum group A-complementing protein) | 5 | UniProt   NCBI |
| PRIMPOL | DNA-directed primase/polymerase protein (hPrimpol1) (EC 2.7.7.-) (Coiled-coil domain-containing protein 111) | 5 | UniProt   NCBI |
| RSF1 | Remodeling and spacing factor 1 (Rsf-1) (HBV pX-associated protein 8) (Hepatitis B virus X-associated protein) (p325 subunit of RSF chromatin-remodeling complex) | 5 | UniProt   NCBI |
| LIG3 | DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3) | 5 | UniProt   NCBI |
Enrichments
| Term ID | Corrected Pval | Fraction Complex Coverage | Proteins | Term Name |
|---|---|---|---|---|
|   GO:0006974 | 5.89920155688e-13 | 0.708333333333 | XPC PRIMPOL PARP1 HLTF RPA3 MACROD1 LIG3 XPA PARP2 APLF POLB PNKP RPA4 TDP1 CHD1L HMCES RPA1 | DNA damage response |
|   GO:0006259 | 1.67806135907e-12 | 0.708333333333 | XPC PRIMPOL PARP1 HLTF RPA3 POLB LIG3 XPA PARP2 APLF SSBP1 RPA4 TDP1 CHD1L RPA1 HMCES PNKP | DNA metabolic process |
|   GO:0006281 | 2.53844969962e-12 | 0.625 | XPC PRIMPOL PARP1 HLTF RPA3 POLB LIG3 XPA APLF PNKP RPA4 TDP1 CHD1L PARP2 RPA1 | DNA repair |
|   WP:WP4946 | 1.08665195728e-11 | 0.375 | XPC PARP1 POLB RPA3 LIG3 XPA RPA1 PARP2 PNKP | DNA repair pathways full network |
|   REAC:R-HSA-73933 | 2.39987197097e-11 | 0.291666666667 | POLB PARP1 RPA3 LIG3 PNKP PARP2 RPA1 | Resolution of Abasic Sites (AP sites) |
|   REAC:R-HSA-5696395 | 9.55961321515e-11 | 0.291666666667 | XPC PARP1 RPA3 XPA RPA1 CHD1L PARP2 | Formation of Incision Complex in GG-NER |
|   REAC:R-HSA-5696399 | 1.56662858408e-10 | 0.333333333333 | XPC PARP1 RPA3 LIG3 XPA RPA1 CHD1L PARP2 | Global Genome Nucleotide Excision Repair (GG-NER) |
|   REAC:R-HSA-73894 | 1.66288378377e-10 | 0.458333333333 | XPC PARP1 POLB RPA3 LIG3 XPA RPA1 CHD1L TDP1 PARP2 PNKP | DNA Repair |
|   REAC:R-HSA-5696398 | 1.36441289313e-09 | 0.333333333333 | XPC PARP1 RPA3 LIG3 XPA RPA1 CHD1L PARP2 | Nucleotide Excision Repair |
|   WP:WP5114 | 2.39521413648e-09 | 0.291666666667 | XPC PARP1 RPA3 LIG3 RPA1 CHD1L XPA | Nucleotide excision repair in xeroderma pigmentosum |
|   KEGG:03410 | 3.55844351849e-09 | 0.25 | POLB PARP1 LIG3 PNKP TDP1 PARP2 | Base excision repair |
|   REAC:R-HSA-73884 | 7.48229636503e-09 | 0.291666666667 | POLB PARP1 RPA3 LIG3 PNKP PARP2 RPA1 | Base Excision Repair |
|   GO:0033554 | 1.03173801321e-08 | 0.708333333333 | XPC PRIMPOL PARP1 HLTF RPA3 MACROD1 LIG3 XPA PARP2 APLF POLB PNKP RPA4 TDP1 CHD1L HMCES RPA1 | cellular response to stress |
|   GO:0006284 | 1.10549516161e-08 | 0.291666666667 | POLB PARP1 RPA3 LIG3 PNKP XPA RPA1 | base-excision repair |
|   REAC:R-HSA-5696400 | 1.29140650853e-08 | 0.25 | PARP1 RPA3 PARP2 RPA1 CHD1L XPA | Dual Incision in GG-NER |
|   CORUM:362 | 1.17907250387e-07 | 0.125 | POLB PNKP LIG3 | DNA ligase III-XRCC1-PNK-DNA-pol III multiprotein complex |
|   CORUM:5243 | 1.17907250387e-07 | 0.125 | TDP1 PNKP LIG3 | XRCC1-LIG3-PNK-TDP1 complex |
|   GO:0003684 | 1.1850063099e-07 | 0.291666666667 | XPC PARP1 RPA3 XPA RPA1 PARP2 PNKP | damaged DNA binding |
|   REAC:R-HSA-110373 | 1.19147992445e-07 | 0.208333333333 | RPA3 POLB RPA1 PARP2 PARP1 | Resolution of AP sites via the multiple-nucleotide patch replacement pathway |
|   WP:WP4752 | 1.36105578971e-07 | 0.208333333333 | POLB LIG3 PNKP PARP2 PARP1 | Base excision repair |
|   GO:0090734 | 1.42779994713e-07 | 0.333333333333 | PARP1 RPA3 APLF RPA1 RPA4 CHD1L PARP2 PNKP | site of DNA damage |
|   GO:0006302 | 3.06259713146e-07 | 0.416666666667 | POLB PARP1 RPA3 LIG3 APLF RPA1 RPA4 TDP1 PARP2 PNKP | double-strand break repair |
|   GO:0005657 | 4.02413417966e-07 | 0.291666666667 | PRIMPOL PARP1 RPA3 HMCES RPA1 RPA4 XPA | replication fork |
|   GO:0006260 | 1.4735469383e-06 | 0.375 | POLB PNKP PARP1 RPA3 LIG3 RPA1 RPA4 PRIMPOL SSBP1 | DNA replication |
|   GO:0006261 | 1.9836512806e-06 | 0.333333333333 | POLB PNKP PARP1 RPA4 LIG3 RPA1 PRIMPOL SSBP1 | DNA-templated DNA replication |
|   KEGG:03420 | 2.01911034344e-06 | 0.208333333333 | XPC XPA RPA1 RPA4 RPA3 | Nucleotide excision repair |
|   KEGG:03430 | 2.9571060341e-06 | 0.166666666667 | RPA3 RPA1 SSBP1 RPA4 | Mismatch repair |
|   CORUM:1004 | 9.84033077196e-06 | 0.125 | RPA3 RPA1 PARP1 | RC complex during S-phase of cell cycle |
|   GO:0003697 | 1.02781054597e-05 | 0.291666666667 | XPC RPA4 RPA1 RPA3 TDP1 HMCES SSBP1 | single-stranded DNA binding |
|   CORUM:1005 | 1.40424645202e-05 | 0.125 | RPA3 RPA1 PARP1 | RC complex during G2/M-phase of cell cycle |
|   WP:WP4016 | 1.79316217329e-05 | 0.208333333333 | TDP1 POLB RPA1 XPA PARP1 | DNA IR damage and cellular response via ATR |
|   KEGG:03030 | 1.93929032814e-05 | 0.166666666667 | RPA3 RPA1 SSBP1 RPA4 | DNA replication |
|   GO:0140097 | 2.45456165629e-05 | 0.333333333333 | POLB APLF PRIMPOL LIG3 HLTF TDP1 CHD1L RSF1 | catalytic activity, acting on DNA |
|   KEGG:03440 | 2.99561003798e-05 | 0.166666666667 | RPA3 RPA1 SSBP1 RPA4 | Homologous recombination |
|   GO:0006950 | 3.08554144989e-05 | 0.75 | XPC PRIMPOL PARP1 HLTF RPA3 MACROD1 CLEC1B XPA PARP2 APLF POLB PNKP RPA4 TDP1 CHD1L LIG3 HMCES RPA1 | response to stress |
|   REAC:R-HSA-5649702 | 4.05978090196e-05 | 0.125 | POLB PNKP LIG3 | APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway |
|   REAC:R-HSA-5693532 | 4.97980583232e-05 | 0.25 | PARP1 RPA3 LIG3 RPA1 TDP1 PARP2 | DNA Double-Strand Break Repair |
|   REAC:R-HSA-110362 | 6.48864838784e-05 | 0.125 | POLB PARP1 PARP2 | POLB-Dependent Long Patch Base Excision Repair |
|   CORUM:7352 | 7.83172113594e-05 | 0.0833333333333 | PARP1 LIG3 | PARP1-LIG3 complex |
|   CORUM:5229 | 7.83172113594e-05 | 0.0833333333333 | RPA3 RPA1 | RPA complex |
|   WP:WP4753 | 8.47731049927e-05 | 0.166666666667 | XPC RPA1 XPA RPA3 | Nucleotide excision repair |
|   GO:0035861 | 0.000101043961432 | 0.25 | PARP1 RPA3 APLF PNKP RPA4 CHD1L | site of double-strand break |
|   GO:0006289 | 0.000118463511905 | 0.25 | XPC RPA4 RPA1 RPA3 XPA PNKP | nucleotide-excision repair |
|   HPA:0460672 | 0.000124999810489 | 0.708333333333 | XPC PARP1 POLB RPA4 RPAIN XPA RNF146 PNKP RSF1 RPA3 TDP1 SSRP1 LIG3 RPA1 HMCES CHD1L SSBP1 | skin 1; melanocytes[>=Medium] |
|   REAC:R-HSA-5685939 | 0.000190565901148 | 0.125 | LIG3 PARP1 PARP2 | HDR through MMEJ (alt-NHEJ) |
|   GO:0005694 | 0.000195046382978 | 0.583333333333 | XPC PRIMPOL PARP1 RPA4 RSF1 XPA PARP2 APLF PNKP RPA3 CHD1L SSRP1 HMCES RPA1 | chromosome |
|   GO:0005662 | 0.00019795084604 | 0.166666666667 | RPA3 RPA1 XPA RPA4 | DNA replication factor A complex |
|   GO:0043596 | 0.000212375784781 | 0.208333333333 | RPA3 XPA RPA1 PARP1 RPA4 | nuclear replication fork |
|   CORUM:7295 | 0.000234715819577 | 0.0833333333333 | RPA1 XPA | ERCC1-RPA1-XPA complex |
|   GO:0032042 | 0.000377078861379 | 0.166666666667 | PRIMPOL LIG3 SSBP1 PARP1 | mitochondrial DNA metabolic process |
|   CORUM:1086 | 0.000468960518513 | 0.0833333333333 | POLB LIG3 | DNA repair complex NEIL1-PNK-Pol(beta)-LigIII(alpha)-XRCC1 |
|   CORUM:1085 | 0.000468960518513 | 0.0833333333333 | POLB LIG3 | DNA repair complex NEIL2-PNK-Pol(beta)-LigIII(alpha)-XRCC1 |
|   REAC:R-HSA-5693538 | 0.000551288581135 | 0.208333333333 | RPA3 LIG3 RPA1 PARP2 PARP1 | Homology Directed Repair |
|   CORUM:2222 | 0.000780816509459 | 0.0833333333333 | RPA3 RPA1 | BLM complex II |
|   CORUM:2738 | 0.000780816509459 | 0.0833333333333 | RPA3 RPA1 | BLM complex II |
|   HPA:0330222 | 0.00144171818133 | 0.708333333333 | XPC PARP1 POLB RPA4 RPAIN XPA PARP2 PNKP RSF1 RPA3 TDP1 SSRP1 LIG3 RPA1 HMCES CHD1L SSBP1 | oral mucosa; squamous epithelial cells[>=Medium] |
|   REAC:R-HSA-5651801 | 0.00151960321974 | 0.125 | RPA3 RPA1 POLB | PCNA-Dependent Long Patch Base Excision Repair |
|   GO:0005654 | 0.00162536746185 | 0.791666666667 | XPC CHD1L RNF146 HLTF RPA3 MACROD1 RPAIN XPA APLF POLB PNKP RSF1 RPA4 TDP1 SSRP1 LIG3 PARP2 PARP1 RPA1 | nucleoplasm |
|   GO:0043504 | 0.00194127795747 | 0.125 | PRIMPOL PARP1 LIG3 | mitochondrial DNA repair |
|   GO:0043601 | 0.00200531430633 | 0.166666666667 | RPA3 RPA1 XPA RPA4 | nuclear replisome |
|   GO:0000002 | 0.00200531430633 | 0.166666666667 | PRIMPOL LIG3 SSBP1 PARP1 | mitochondrial genome maintenance |
|   GO:0031974 | 0.00208716428434 | 0.875 | XPC CHD1L PRIMPOL RNF146 HLTF RPA3 MACROD1 RPAIN XPA APLF POLB PNKP RSF1 RPA4 TDP1 SSRP1 LIG3 RPA1 PARP2 PARP1 SSBP1 | membrane-enclosed lumen |
|   GO:0043233 | 0.00208716428434 | 0.875 | XPC CHD1L PRIMPOL RNF146 HLTF RPA3 MACROD1 RPAIN XPA APLF POLB PNKP RSF1 RPA4 TDP1 SSRP1 LIG3 RPA1 PARP2 PARP1 SSBP1 | organelle lumen |
|   GO:0070013 | 0.00208716428434 | 0.875 | XPC CHD1L PRIMPOL RNF146 HLTF RPA3 MACROD1 RPAIN XPA APLF POLB PNKP RSF1 RPA4 TDP1 SSRP1 LIG3 RPA1 PARP2 PARP1 SSBP1 | intracellular organelle lumen |
|   REAC:R-HSA-6781827 | 0.00209147933066 | 0.166666666667 | RPA3 LIG3 RPA1 XPA | Transcription-Coupled Nucleotide Excision Repair (TC-NER) |
|   REAC:R-HSA-5696397 | 0.00261657723191 | 0.125 | RPA3 RPA1 LIG3 | Gap-filling DNA repair synthesis and ligation in GG-NER |
|   CORUM:248 | 0.00279967512746 | 0.0833333333333 | RPA3 RPA1 | BRAFT complex |
|   GO:0030894 | 0.00290660524743 | 0.166666666667 | RPA3 RPA1 XPA RPA4 | replisome |
|   HPA:0620222 | 0.00335045720635 | 0.666666666667 | XPC PARP1 RPA4 RPAIN XPA PARP2 RNF146 PNKP RSF1 RPA3 TDP1 CHD1L LIG3 RPA1 HMCES SSBP1 | vagina; squamous epithelial cells[>=Medium] |
|   GO:0005634 | 0.00351254171072 | 0.916666666667 | XPC LIG3 RPA1 PARP1 APLF PRIMPOL RNF146 SSRP1 TDP1 PARP2 PNKP HMGN4 RPA4 HLTF CHD1L POLB RPA3 RPAIN MACROD1 SSBP1 RSF1 XPA | nucleus |
|   GO:0160002 | 0.00387837112504 | 0.125 | APLF PARP2 CHD1L | ADP-D-ribose modification-dependent protein binding |
|   GO:0072572 | 0.00387837112504 | 0.125 | APLF PARP2 RNF146 | poly-ADP-D-ribose binding |
|   KEGG:03460 | 0.00415966213321 | 0.125 | RPA3 RPA1 RPA4 | Fanconi anemia pathway |
|   CORUM:244 | 0.004268704563 | 0.0833333333333 | RPA3 RPA1 | BRAFT complex |
|   REAC:R-HSA-110381 | 0.00463344224878 | 0.0833333333333 | POLB LIG3 | Resolution of AP sites via the single-nucleotide replacement pathway |
|   GO:0031981 | 0.00500899293269 | 0.791666666667 | XPC CHD1L RNF146 HLTF RPA3 MACROD1 RPAIN XPA APLF POLB PNKP RSF1 RPA4 TDP1 SSRP1 LIG3 PARP2 PARP1 RPA1 | nuclear lumen |
|   CORUM:7388 | 0.00511730766433 | 0.0833333333333 | SSRP1 RSF1 | CENP-A nucleosomal complex |
|   WP:WP466 | 0.00549087301274 | 0.125 | RPA3 RPA1 RPA4 | DNA replication |
|   GO:0003677 | 0.00566024523419 | 0.541666666667 | XPC PARP1 RPA3 XPA PARP2 HLTF PNKP RPA4 TDP1 SSRP1 RPA1 HMCES SSBP1 | DNA binding |
|   REAC:R-HSA-68962 | 0.00615367849057 | 0.125 | RPA3 RPA1 RPA4 | Activation of the pre-replicative complex |
|   HPA:0301371 | 0.00717698350145 | 0.416666666667 | XPC PNKP PARP1 RSF1 LIG3 XPA RPA1 CHD1L PARP2 SSBP1 | lung; alveolar cells type II[>=Low] |
|   HPA:0301373 | 0.00768922996811 | 0.291666666667 | XPC PARP1 RSF1 LIG3 PNKP XPA RPA1 | lung; alveolar cells type II[High] |
|   REAC:R-HSA-5696394 | 0.00946360239723 | 0.125 | XPC PARP1 PARP2 | DNA Damage Recognition in GG-NER |
|   HPA:0610833 | 0.0108986421156 | 0.458333333333 | XPC POLB RPA4 RPAIN XPA PNKP RPA3 CHD1L LIG3 HMCES RPA1 | urinary bladder; urothelial cells[High] |
|   HPA:0190222 | 0.012207692802 | 0.708333333333 | XPC PARP1 POLB RPA4 RPAIN XPA PARP2 RNF146 PNKP RSF1 RPA3 TDP1 CHD1L LIG3 RPA1 HMCES SSBP1 | esophagus; squamous epithelial cells[>=Medium] |
|   GO:0006139 | 0.0122784364365 | 0.791666666667 | XPC PRIMPOL PARP1 HLTF RPA3 MACROD1 RSF1 XPA PARP2 APLF POLB SSBP1 RPA4 TDP1 CHD1L LIG3 RPA1 HMCES PNKP | nucleobase-containing compound metabolic process |
|   HPA:0301363 | 0.0151195530664 | 0.25 | XPC PARP1 RSF1 PNKP XPA RPA1 | lung; alveolar cells type I[High] |
|   HPA:0340461 | 0.0160888782816 | 0.625 | XPC RPA3 PARP1 POLB SSRP1 RPAIN XPA RNF146 PNKP RSF1 RPA4 CHD1L LIG3 HMCES RPA1 | ovary; ovarian stroma cells[>=Low] |
|   HPA:0630052 | 0.0165342702483 | 0.625 | XPC PARP1 POLB RPA4 RPAIN LIG3 RNF146 PNKP RSF1 RPA3 TDP1 CHD1L RPA1 XPA SSBP1 | cervix; glandular cells[>=Medium] |
|   HPA:0530000 | 0.0173750435225 | 0.75 | XPC PARP1 POLB RPA3 CLEC1B XPA RPAIN RNF146 PNKP RSF1 RPA4 TDP1 SSRP1 LIG3 RPA1 HMCES CHD1L SSBP1 | spleen |
|   GO:0090304 | 0.0192240576541 | 0.75 | XPC PRIMPOL PARP1 HLTF RPA3 POLB RSF1 XPA PARP2 APLF SSBP1 RPA4 TDP1 CHD1L LIG3 RPA1 HMCES PNKP | nucleic acid metabolic process |
|   GO:0046483 | 0.0202686116498 | 0.791666666667 | XPC PRIMPOL PARP1 HLTF RPA3 MACROD1 RSF1 XPA PARP2 APLF POLB SSBP1 RPA4 TDP1 CHD1L LIG3 RPA1 HMCES PNKP | heterocycle metabolic process |
|   HPA:0530711 | 0.0208908258389 | 0.708333333333 | XPC PARP1 POLB RPA4 CLEC1B XPA RPAIN RNF146 PNKP RSF1 RPA3 TDP1 SSRP1 LIG3 HMCES CHD1L RPA1 | spleen; cells in red pulp[>=Low] |
|   GO:0006725 | 0.0213783944493 | 0.791666666667 | XPC PRIMPOL PARP1 HLTF RPA3 MACROD1 RSF1 XPA PARP2 APLF POLB SSBP1 RPA4 TDP1 CHD1L LIG3 RPA1 HMCES PNKP | cellular aromatic compound metabolic process |
|   HPA:0380512 | 0.0217493234091 | 0.583333333333 | XPC PARP1 RPA4 RPAIN XPA RNF146 PNKP RSF1 RPA3 TDP1 CHD1L LIG3 HMCES RPA1 | placenta; decidual cells[>=Medium] |
|   HPA:0460671 | 0.0219667205243 | 0.708333333333 | XPC PARP1 POLB RPA4 RPAIN XPA RNF146 PNKP RSF1 RPA3 TDP1 SSRP1 LIG3 RPA1 HMCES CHD1L SSBP1 | skin 1; melanocytes[>=Low] |
|   GO:0000012 | 0.0231700664584 | 0.125 | APLF PARP1 TDP1 | single strand break repair |
|   HPA:0301361 | 0.0233228989055 | 0.333333333333 | XPC PARP1 RSF1 LIG3 PNKP CHD1L XPA RPA1 | lung; alveolar cells type I[>=Low] |
|   HPA:0610832 | 0.0249318997689 | 0.75 | XPC PARP1 POLB RPA4 RPAIN XPA PARP2 RNF146 PNKP RSF1 RPA3 TDP1 SSRP1 LIG3 RPA1 HMCES CHD1L SSBP1 | urinary bladder; urothelial cells[>=Medium] |
|   HPA:0620000 | 0.0260622677864 | 0.75 | XPC PARP1 POLB RPA4 RPAIN XPA PARP2 RNF146 PNKP RSF1 RPA3 TDP1 SSRP1 LIG3 RPA1 HMCES CHD1L SSBP1 | vagina |
|   HPA:0620221 | 0.0260622677864 | 0.75 | XPC PARP1 POLB RPA4 RPAIN XPA PARP2 RNF146 PNKP RSF1 RPA3 TDP1 SSRP1 LIG3 RPA1 HMCES CHD1L SSBP1 | vagina; squamous epithelial cells[>=Low] |
|   HPA:0310441 | 0.0262067987726 | 0.75 | XPC PARP1 POLB RPA3 CLEC1B XPA PARP2 RNF146 RPAIN PNKP RSF1 RPA4 CHD1L SSRP1 LIG3 RPA1 HMCES SSBP1 | lymph node; non-germinal center cells[>=Low] |
|   HPA:0600441 | 0.029820633559 | 0.75 | XPC PARP1 POLB RPA3 CLEC1B XPA PARP2 RNF146 RPAIN PNKP RSF1 RPA4 CHD1L SSRP1 LIG3 RPA1 HMCES SSBP1 | tonsil; non-germinal center cells[>=Low] |
|   HPA:0380511 | 0.0318238426814 | 0.666666666667 | XPC PARP1 POLB RPA4 RPAIN XPA PARP2 RNF146 PNKP RSF1 RPA3 TDP1 CHD1L LIG3 HMCES RPA1 | placenta; decidual cells[>=Low] |
|   GO:0006264 | 0.0318245054916 | 0.125 | PRIMPOL SSBP1 LIG3 | mitochondrial DNA replication |
|   GO:0140640 | 0.0367253818481 | 0.333333333333 | POLB APLF PRIMPOL LIG3 HLTF TDP1 CHD1L RSF1 | catalytic activity, acting on a nucleic acid |
|   GO:1901360 | 0.0396358438741 | 0.791666666667 | XPC PRIMPOL PARP1 HLTF RPA3 MACROD1 RSF1 XPA PARP2 APLF POLB SSBP1 RPA4 TDP1 CHD1L LIG3 RPA1 HMCES PNKP | organic cyclic compound metabolic process |
|   HPA:0050011 | 0.0401170697614 | 0.5 | XPC PARP1 RPA4 RPAIN LIG3 RNF146 RPA1 RSF1 RPA3 CHD1L XPA PNKP | breast; adipocytes[>=Low] |
|   CORUM:929 | 0.0425481611519 | 0.0833333333333 | SSRP1 RSF1 | CEN complex |
|   REAC:R-HSA-6782210 | 0.0433642014313 | 0.125 | RPA3 RPA1 LIG3 | Gap-filling DNA repair synthesis and ligation in TC-NER |
|   HPA:0301362 | 0.0446515233333 | 0.291666666667 | XPC PARP1 RSF1 LIG3 PNKP XPA RPA1 | lung; alveolar cells type I[>=Medium] |
|   REAC:R-HSA-6782135 | 0.0454478801614 | 0.125 | RPA3 RPA1 XPA | Dual incision in TC-NER |
|   WP:WP2446 | 0.0466830573385 | 0.125 | HLTF RPA1 RPA3 | Retinoblastoma gene in cancer |
|   HPA:0380513 | 0.0468244833363 | 0.333333333333 | PARP1 RPA3 RPAIN LIG3 PNKP CHD1L XPA RPA1 | placenta; decidual cells[High] |
|   HPA:0330221 | 0.0475000581438 | 0.75 | XPC PARP1 POLB RPA4 RPAIN XPA PARP2 RNF146 PNKP RSF1 RPA3 TDP1 SSRP1 LIG3 RPA1 HMCES CHD1L SSBP1 | oral mucosa; squamous epithelial cells[>=Low] |
|   HPA:0330000 | 0.0475000581438 | 0.75 | XPC PARP1 POLB RPA4 RPAIN XPA PARP2 RNF146 PNKP RSF1 RPA3 TDP1 SSRP1 LIG3 RPA1 HMCES CHD1L SSBP1 | oral mucosa |
|   HPA:0600222 | 0.0477231007219 | 0.666666666667 | POLB PARP1 RPA3 RPAIN XPA PARP2 RNF146 RSF1 PNKP RPA4 SSRP1 CHD1L LIG3 RPA1 HMCES SSBP1 | tonsil; squamous epithelial cells[>=Medium] |
|   CORUM:923 | 0.0497620750785 | 0.0416666666667 | RSF1 | SNF2L-RSF1 complex |
|   CORUM:212 | 0.0497620750785 | 0.0416666666667 | LIG3 | DNA ligase III-XRCC1 complex |
|   CORUM:363 | 0.0497620750785 | 0.0416666666667 | LIG3 | DNA ligase III-XRCC1 complex |
|   CORUM:365 | 0.0497620750785 | 0.0416666666667 | LIG3 | DNA ligase III-XRCC1 complex |
|   WP:WP3645 | 0.0498877769309 | 0.0833333333333 | PARP1 PARP2 | NAD biosynthetic pathways |
Edges
| Protein 1 | Protein 2 | Score | ProteomeHD | Interface Overlap |
|---|---|---|---|---|
|  RPA3 |  RPA2 | 1.0 | 0.958           |
structurally_consistent (dimer)        
|
|  RPA1 |  RPA2 | 1.0 | 0.802           |          |
|  RPA3 |  RPA1 | 1.0 | 0.658           |
mutually_exclusive (Q13156)        
|
|  XRCC6 |  XRCC5 | 1.0 | 0.96           |
structurally_consistent (dimer)        
|
|  LIG3 |  XRCC1 | 1.0 | 0.55           |          |
|  POLB |  XRCC1 | 0.999 | 0.084           |
mutually_exclusive (P35244)        
|
|  POLB |  PARP2 | 0.999 | 0.04           |          |
|  LIG3 |  POLB | 0.999 | 0.1           |          |
|  RPA1 |  RPAIN | 0.999 | 0.196           |          |
|  RPA2 |  RPAIN | 0.999 | 0.208           |          |
|  RNF146 |  PARP2 | 0.999 | 0.088           |
structurally_consistent (dimer)        
|
|  RPA1 |  RPA4 | 0.998 |            |
structurally_consistent (dimer)        
|
|  XRCC5 |  APLF | 0.998 |            |
structurally_consistent (dimer)        
|
|  LIG3 |  PNKP | 0.998 | 0.18           |          |
|  XRCC6 |  APLF | 0.998 |            |          |
|  XRCC6 |  RPA2 | 0.997 | 0.456           |          |
|  APLF |  XPC | 0.997 |            |          |
|  APLF |  PARP1 | 0.997 |            |          |
|  APLF |  PARP2 | 0.997 |            |          |
|  RPAIN |  RPA4 | 0.997 |            |          |
|  XPA |  RPA3 | 0.996 | 0.106           |          |
|  APLF |  LIG3 | 0.996 |            |          |
|  RSF1 |  HMGN4 | 0.996 | 0.054           |          |
|  LIG3 |  TDP1 | 0.996 | 0.0660385964912           |          |
|  XPC |  RPA2 | 0.995 | 0.14           |          |
|  XRCC6 |  PARP1 | 0.995 | 0.55           |
structurally_consistent (dimer)        
|
|  APLF |  RPA2 | 0.995 |            |          |
|  APLF |  RPA1 | 0.995 |            |          |
|  RPA3 |  RPA4 | 0.995 |            |
structurally_consistent (dimer)        
|
|  XPC |  RPA1 | 0.994 | 0.218           |          |
|  PARP2 |  H2AC4 | 0.994 |            |          |
|  APLF |  HLTF | 0.994 |            |          |
|  PNKP |  POLB | 0.994 | 0.108           |          |
|  SSRP1 |  PARP1 | 0.994 | 0.562           |          |
|  XPC |  PARP2 | 0.993 | 0.032           |          |
|  PNKP |  XRCC1 | 0.993 | 0.13           |          |
|  XPC |  RPA3 | 0.993 | 0.156           |          |
|  SSBP1 |  RPA2 | 0.993 | 0.24           |          |
|  APLF |  POLB | 0.993 |            |          |
|  HLTF |  CHD1L | 0.993 | 0.09           |          |
|  XPC |  PARP1 | 0.992 | 0.363073394495           |          |
|  SSBP1 |  RPA4 | 0.992 |            |          |
|  LIG3 |  PARP2 | 0.991 | 0.076           |          |
|  MACROD1 |  PARP1 | 0.991 | 0.166           |
structurally_consistent (dimer)        
|
|  APLF |  XRCC1 | 0.99 |            |          |
|  XPC |  RPA4 | 0.99 |            |          |
|  XRCC5 |  RPA2 | 0.99 | 0.424           |          |
|  RPA3 |  RPAIN | 0.989 | 0.288           |          |
|  XPA |  RPA2 | 0.989 | 0.196           |          |
|  LIG3 |  RPA2 | 0.989 | 0.106           |          |
|  SSRP1 |  APLF | 0.989 |            |          |
|  RNF146 |  CHD1L | 0.988 | 0.06           |          |
|  HMCES |  RPA1 | 0.988 | 0.08           |          |
|  XPC |  CHD1L | 0.988 | 0.024           |          |
|  POLB |  TDP1 | 0.986 | 0.13           |          |
|  LIG3 |  RPA4 | 0.986 |            |
structurally_consistent (dimer)        
|
|  RPA2 |  PARP1 | 0.985 | 0.424           |          |
|  XPC |  RNF146 | 0.984 | 0.182           |
structurally_consistent (dimer)        
|
|  HLTF |  XPC | 0.984 | 0.032           |          |
|  RPA2 |  PARP2 | 0.983 | 0.048           |          |
|  APLF |  RPA3 | 0.983 |            |          |
|  RPAIN |  PARP1 | 0.983 | 0.226           |          |
|  LIG3 |  PARP1 | 0.982 | 0.53           |          |
|  LIG3 |  XPC | 0.981 | 0.164           |          |
|  MACROD1 |  RPA2 | 0.978 | 0.026           |          |
|  HLTF |  RPA2 | 0.977 | 0.07           |          |
|  HMGN4 |  XPC | 0.977 | 0.032           |          |
|  XRCC5 |  H2AC4 | 0.977 |            |          |
|  XPC |  POLB | 0.976 | 0.19           |          |
|  POLB |  PARP1 | 0.974 | 0.313555555556           |          |
|  RPA1 |  SSBP1 | 0.974 | 0.244           |          |
|  LIG3 |  HLTF | 0.973 | 0.1           |          |
|  HLTF |  RPA1 | 0.972 | 0.204166666667           |          |
|  RNF146 |  PARP1 | 0.972 | 0.216           |          |
|  HMGN4 |  PARP2 | 0.972 | 0.046           |          |
|  RPA4 |  PARP1 | 0.97 |            |          |
|  XRCC6 |  PARP2 | 0.97 | 0.206           |          |
|  SSRP1 |  POLB | 0.97 | 0.154           |          |
|  HMCES |  RPA4 | 0.969 |            |          |
|  PARP2 |  CHD1L | 0.966 | 0.054           |          |
|  XRCC6 |  CHD1L | 0.966 | 0.198           |          |
|  XRCC5 |  CHD1L | 0.965 | 0.264           |          |
|  HMCES |  RPA2 | 0.965 | 0.166           |          |
|  MACROD1 |  XPC | 0.964 | 0.022           |          |
|  HLTF |  PARP1 | 0.963 | 0.482857142857           |          |
|  RPA1 |  CHD1L | 0.962 | 0.204           |          |
|  LIG3 |  RPA3 | 0.962 | 0.12           |          |
|  SSBP1 |  CLEC1B | 0.96 |            |          |
|  XRCC6 |  LIG3 | 0.96 | 0.338           |          |
|  CHD1L |  PARP1 | 0.958 | 0.470310125952           |          |
|  HLTF |  RPA3 | 0.957 | 0.048           |          |
|  RPA3 |  HMCES | 0.957 | 0.072           |          |
|  XRCC5 |  LIG3 | 0.955 | 0.306           |          |
|  SSRP1 |  H2AC4 | 0.952 |            |          |
|  PRIMPOL |  RPA2 | 0.951 |            |          |
|  LIG3 |  RPA1 | 0.951 | 0.202           |          |
|  MACROD1 |  PARP2 | 0.95 | 0.034           |
structurally_consistent (dimer)        
|
|  XPA |  SSBP1 | 0.948 | 0.062           |          |
|  SSRP1 |  MACROD1 | 0.947 | 0.04           |          |
|  XRCC1 |  CHD1L | 0.943 | 0.102           |          |
|  XRCC1 |  RPA2 | 0.943 | 0.232           |          |
|  SSRP1 |  CHD1L | 0.94 | 0.144           |          |
|  XRCC6 |  RPA4 | 0.937 |            |          |
|  XPC |  H2AC4 | 0.936 |            |          |
|  XRCC6 |  XPC | 0.932 | 0.314           |          |
|  RPA2 |  RPA4 | 0.931 |            |
mutually_exclusive (P35244)        
|
|  HMGN4 |  SSRP1 | 0.931 | 0.094           |          |
|  PRIMPOL |  SSBP1 | 0.926 |            |          |
|  XRCC6 |  H2AC4 | 0.924 |            |          |
|  RPA3 |  RNF146 | 0.92 | 0.148           |          |
|  LIG3 |  CHD1L | 0.92 | 0.094           |          |
|  XRCC6 |  SSRP1 | 0.92 | 0.588           |          |
|  XRCC1 |  TDP1 | 0.918 | 0.172           |          |
|  SSRP1 |  RNF146 | 0.915 | 0.106           |          |
|  HMGN4 |  XRCC6 | 0.914 | 0.274           |          |
|  SSRP1 |  XPC | 0.914 | 0.184           |
structurally_consistent (dimer)        
|
|  RNF146 |  RPA2 | 0.91 | 0.112           |          |
|  HMGN4 |  XRCC5 | 0.909 | 0.296571428571           |          |
|  XRCC1 |  PARP2 | 0.908 | 0.07           |          |
|  XRCC5 |  PARP1 | 0.905 | 0.672           |
mutually_exclusive (P12956)        
|
|  HMGN4 |  H2AC4 | 0.904 |            |          |
|  APLF |  TDP1 | 0.904 |            |          |
|  SSRP1 |  RPA2 | 0.904 | 0.323           |          |
|  HLTF |  RNF146 | 0.903 | 0.094           |          |
|  RPA2 |  CHD1L | 0.9 | 0.082           |          |
|  SSRP1 |  LIG3 | 0.896 | 0.108           |          |
|  HLTF |  H2AC4 | 0.896 |            |          |
|  H2AC4 |  PARP1 | 0.885 |            |          |
|  RPA3 |  PARP2 | 0.883 | 0.078           |          |
|  XPA |  RPA1 | 0.88 | 0.122           |          |
|  HLTF |  POLB | 0.878 | 0.036           |          |
|  RPA3 |  SSBP1 | 0.875 | 0.348           |          |
|  PNKP |  TDP1 | 0.862 | 0.12           |          |
|  XRCC6 |  RNF146 | 0.862 | 0.136           |          |
|  XRCC5 |  RNF146 | 0.861 | 0.136           |          |
|  APLF |  H2AC4 | 0.86 |            |          |
|  XPC |  SSBP1 | 0.859 | 0.136           |          |
|  PRIMPOL |  RPA1 | 0.857 |            |          |
|  SSRP1 |  RPA1 | 0.855 | 0.398           |          |
|  XRCC5 |  XPC | 0.853 | 0.292           |          |
|  XRCC5 |  RPA4 | 0.852 |            |          |
|  RSF1 |  H2AC4 | 0.848 |            |          |
|  RSF1 |  LIG3 | 0.841 | 0.176           |          |
|  MACROD1 |  RPA1 | 0.841 | 0.052           |          |
|  RPA3 |  CHD1L | 0.836 | 0.102           |          |
|  RPA1 |  RNF146 | 0.834 | 0.112           |          |
|  XRCC5 |  SSRP1 | 0.831 | 0.408           |          |
|  POLB |  RPA1 | 0.825 | 0.112           |          |
|  XRCC5 |  HLTF | 0.823 | 0.114           |          |
|  POLB |  RPA2 | 0.823 | 0.1           |          |
|  APLF |  CHD1L | 0.818 |            |          |
|  HMCES |  PARP2 | 0.814 | 0.034           |          |
|  SSRP1 |  HMCES | 0.814 | 0.146           |          |
|  XRCC6 |  RPA3 | 0.808 | 0.612           |          |
|  XRCC6 |  XRCC1 | 0.807 | 0.336           |          |
|  SSRP1 |  HLTF | 0.795 | 0.186           |          |
|  XRCC6 |  POLB | 0.794 | 0.302           |          |
|  HLTF |  XRCC1 | 0.791 | 0.07           |          |
|  XPC |  TDP1 | 0.787 | 0.05           |          |
|  PARP2 |  RPA4 | 0.786 |            |          |
|  TDP1 |  PARP2 | 0.785 | 0.092           |          |
|  XRCC5 |  MACROD1 | 0.779 | 0.186           |          |
|  SSRP1 |  PARP2 | 0.777 | 0.266           |          |
|  POLB |  RPA3 | 0.737 | 0.106           |
structurally_consistent (dimer)        
|
|  MACROD1 |  RPA3 | 0.734 | 0.052           |
mutually_exclusive (P41208)        
|
|  HMGN4 |  PARP1 | 0.729 | 0.09           |          |
|  XPC |  HMCES | 0.716 | 0.01           |          |
|  XRCC5 |  POLB | 0.71 | 0.306           |          |
|  RSF1 |  XPC | 0.708 | 0.052           |          |
|  RSF1 |  PARP2 | 0.691 | 0.038           |          |
|  SSRP1 |  RPA4 | 0.681 |            |          |
|  PNKP |  PARP2 | 0.661 | 0.046           |          |
|  HLTF |  PARP2 | 0.654 | 0.086           |          |
|  RSF1 |  SSRP1 | 0.652 | 0.254           |          |
|  RPA1 |  H2AC4 | 0.644 |            |          |
|  HMCES |  RPAIN | 0.643 | 0.034           |          |
|  XRCC6 |  MACROD1 | 0.63 | 0.2           |          |
|  PNKP |  RPA2 | 0.624 | 0.1           |          |
|  XRCC6 |  RPA1 | 0.614 | 0.654           |          |
|  RPA1 |  PARP1 | 0.605 | 0.63           |          |
|  XRCC6 |  HLTF | 0.561 | 0.106           |          |
|  RPA1 |  PARP2 | 0.555 | 0.11           |          |
|  XRCC5 |  PARP2 | 0.538 | 0.198           |          |
|  XRCC5 |  PNKP | 0.532 | 0.336193548387           |          |
|  SSRP1 |  RPA3 | 0.516 | 0.368           |          |
|  XRCC5 |  RPA1 | 0.516 | 0.632           |          |
|  XPC |  XRCC1 | 0.515 | 0.126           |          |
|  LIG3 |  HMCES | 0.515 | 0.052           |          |
|  LIG3 |  RPAIN | 0.512 | 0.1           |          |
|  PRIMPOL |  RPA3 | 0.505 |            |          |
|  XPC |  RPAIN | 0.469 | 0.062           |          |
|  TDP1 |  RPA1 | 0.465 | 0.11           |          |
|  RPA3 |  H2AC4 | 0.462 |            |          |
|  TDP1 |  RPA3 | 0.457 | 0.034           |          |
|  XRCC1 |  H2AC4 | 0.436 |            |          |
|  XRCC6 |  HMCES | 0.433 | 0.08           |          |
|  RPA2 |  H2AC4 | 0.43 |            |          |
|  XRCC1 |  RPA1 | 0.429 | 0.22           |          |
|  PARP2 |  PARP1 | 0.423 | 0.307277777778           |
mutually_exclusive (Q9BQ69)        
|
|  XRCC5 |  HMCES | 0.41 | 0.088           |          |
|  RSF1 |  XRCC1 | 0.405 | 0.232           |          |
|  SSRP1 |  XRCC1 | 0.399 | 0.196           |          |
|  RSF1 |  RPA3 | 0.391 | 0.113           |          |
|  RSF1 |  RPA2 | 0.386 | 0.144           |          |
|  TDP1 |  RPA2 | 0.379 | 0.042           |          |
|  XRCC6 |  PNKP | 0.375 | 0.308           |          |
|  XPA |  HMCES | 0.372 | 0.092           |          |
|  HMCES |  PARP1 | 0.355 | 0.144333333333           |          |
|  LIG3 |  RNF146 | 0.345 | 0.064           |          |
|  RSF1 |  XRCC6 | 0.34 | 0.31           |          |
|  XRCC5 |  RPA3 | 0.32 | 0.578           |          |
|  TDP1 |  PARP1 | 0.314 | 0.214           |          |
|  LIG3 |  H2AC4 | 0.305 |            |
structurally_consistent (dimer)        
|
|  LIG3 |  MACROD1 | 0.304 | 0.036           |          |
|  APLF |  PNKP | 0.297 |            |          |
|  PNKP |  PARP1 | 0.292 | 0.338764705882           |          |
|  RNF146 |  H2AC4 | 0.291 |            |          |
|  SSRP1 |  TDP1 | 0.284 | 0.187333333333           |          |
|  HLTF |  RPAIN | 0.283 | 0.078           |          |
|  SSBP1 |  PARP1 | 0.264 | 0.462           |          |
|  XRCC1 |  RPA3 | 0.253 | 0.098           |
structurally_consistent (dimer)        
|
|  RSF1 |  HMCES | 0.251 | 0.024           |          |
|  RPA3 |  PARP1 | 0.242 | 0.42           |          |
|  RSF1 |  XRCC5 | 0.239 | 0.25           |          |
|  XRCC5 |  XRCC1 | 0.234 | 0.286           |          |
|  XRCC1 |  PARP1 | 0.23 | 0.434955555556           |          |
|  PARP2 |  RPAIN | 0.204 | 0.088           |          |
|  SSRP1 |  RPAIN | 0.195 | 0.094           |          |
|  RSF1 |  PARP1 | 0.193 | 0.334           |          |
|  RSF1 |  HLTF | 0.172 | 0.062           |          |
|  SSBP1 |  PARP2 | 0.17 | 0.09           |          |
|  XRCC1 |  RNF146 | 0.164 | 0.14           |          |
|  POLB |  CHD1L | 0.115 | 0.064           |          |
|  XRCC6 |  TDP1 | 0.114 | 0.365333333333           |          |
|  XPC |  PNKP | 0.111 | 0.108           |          |
|  PRIMPOL |  H2AC4 | 0.109 |            |          |
|  RSF1 |  RPA1 | 0.103 | 0.118362934363           |          |
|  HLTF |  TDP1 | 0.095 | 0.06           |          |
|  TDP1 |  CHD1L | 0.094 | 0.17           |          |
|  SSBP1 |  RPAIN | 0.091 | 0.076           |          |
|  TDP1 |  H2AC4 | 0.091 |            |          |
|  HMCES |  SSBP1 | 0.086 | 0.064           |          |
|  POLB |  HMCES | 0.085 | 0.022           |          |
|  APLF |  HMCES | 0.082 |            |          |
|  RSF1 |  APLF | 0.079 |            |          |
|  RSF1 |  CHD1L | 0.079 | 0.054           |          |
|  XRCC5 |  TDP1 | 0.078 | 0.278           |          |
|  XPC |  XPA | 0.076 | 0.094           |          |
|  XRCC5 |  RPAIN | 0.073 | 0.136           |          |
|  HLTF |  HMCES | 0.072 | 0.046           |          |
|  PNKP |  RPA1 | 0.071 | 0.106           |          |
|  XRCC1 |  HMCES | 0.069 | 0.068           |          |
|  PNKP |  HMCES | 0.068 | 0.054           |          |
|  HLTF |  MACROD1 | 0.067 | 0.036           |          |
|  XRCC6 |  RPAIN | 0.067 | 0.232           |          |
|  HMGN4 |  RPA1 | 0.062 | 0.08           |          |
|  HMGN4 |  RPA2 | 0.06 | 0.024           |          |
|  XPA |  PARP1 | 0.059 | 0.212275862069           |          |
|  APLF |  SSBP1 | 0.058 |            |          |
|  HMGN4 |  RPA3 | 0.054 | 0.05           |          |
|  CHD1L |  H2AC4 | 0.053 |            |          |
|  HLTF |  PNKP | 0.053 | 0.042           |          |
|  HMCES |  H2AC4 | 0.051 |            |          |
|  HMCES |  CHD1L | 0.047 | 0.036           |          |
|  LIG3 |  SSBP1 | 0.042 | 0.094           |          |
|  SSRP1 |  PNKP | 0.04 | 0.104           |          |
|  POLB |  H2AC4 | 0.037 |            |          |
|  HMGN4 |  HLTF | 0.033 | 0.068           |          |
|  HLTF |  SSBP1 | 0.031 | 0.05           |          |
|  XRCC5 |  SSBP1 | 0.031 | 0.332           |          |
|  HLTF |  RPA4 | 0.024 |            |          |
|  SSBP1 |  H2AC4 | 0.023 |            |          |
|  HLTF |  XPA | 0.021 | 0.078           |          |
|  RSF1 |  SSBP1 | 0.016 | 0.136           |          |
|  XRCC1 |  SSBP1 | 0.016 | 0.156           |          |
|  SSRP1 |  XPA | 0.016 | 0.096           |          |
|  PNKP |  RPA3 | 0.015 | 0.056           |          |
|  XRCC6 |  XPA | 0.014 | 0.256           |          |
|  RNF146 |  SSBP1 | 0.013 | 0.14           |          |
|  XPA |  H2AC4 | 0.013 |            |          |
|  PNKP |  H2AC4 | 0.009 |            |          |
|  MACROD1 |  H2AC4 | 0.009 |            |          |
|  XRCC6 |  SSBP1 | 0.008 | 0.374           |          |
|  CLEC1B |  PARP1 | 0.006 |            |          |
|  HMGN4 |  SSBP1 | 0.005 | 0.086           |          |
|  XRCC5 |  XPA | 0.004 | 0.192           |
structurally_consistent (dimer)        
|
|  MACROD1 |  SSBP1 | 0.004 | 0.104           |          |
|  PRIMPOL |  XRCC5 | 0.004 |            |          |
|  RPA4 |  H2AC4 | 0.004 |            |
mutually_exclusive (P49916)        
|
|  POLB |  SSBP1 | 0.004 | 0.162           |          |
|  CLEC1B |  H2AC4 | 0.004 |            |          |
|  SSBP1 |  CHD1L | 0.004 | 0.18           |          |
|  RPA1 |  CLEC1B | 0.004 |            |          |
|  PNKP |  SSBP1 | 0.003 | 0.048           |          |
|  XRCC6 |  CLEC1B | 0.002 |            |          |
|  RPAIN |  H2AC4 | 0.002 |            |          |
|  TDP1 |  SSBP1 | 0.001 | 0.046           |          |
|  XRCC5 |  CLEC1B | 0.001 |            |          |
|  SSRP1 |  SSBP1 | 0.001 | 0.214           |          |
Related Complexes